EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS131-00046

Organism

Homo sapiens

Tissue/cell

ME-1

Coordinate

chr1:3432420-3433890

Target genes

Number: 11
Name	Ensembl ID

ARHGEF16	ENSG00000130762
MEGF6	ENSG00000162591
TPRG1L	ENSG00000158109
TP73	ENSG00000078900
WRAP73	ENSG00000116213
RP5	ENSG00000244553
LRRC47	ENSG00000130764
CEP104	ENSG00000116198
DFFB	ENSG00000169598
C1orf174	ENSG00000198912
RP13	ENSG00000236423

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr1:3433225-3433240	GGCGGTCAGAGGTCA	+	6.19
NR2F1	MA0017.2	chr1:3433231-3433244	CAGAGGTCAACAG	+	6.44
PPARG	MA0066.1	chr1:3432507-3432527	AGGGGGTGACTGAGACCCAG	-	6.27

Enhancer Sequence

CTAAGCACCA GGGGTCTCTG AGAAGCTGCA AGCGAGGGCT CAGTGCCCCA GCAGGCTGCA 60
TCTCCCTGGA GGAGGACGCA GGCTGGCAGG GGGTGACTGA GACCCAGGCA TCTCACCATC 120
GTGGTCCTTA GGCCAGGGTG GGGGCAGATG TGGGGATGCC GTGGACAGCT GCCATGGGCC 180
ACAGGCTTGG CCCCCAGTTC CCAAGGGACC AGCACAGCTC CTACCCACCC CAGGCCAGGC 240
CACACCTCAC GCCTGTCCCC ACGCATTGCC CATGCCCCCA TTCCTTCATG CACATTCCTG 300
CAGAGCATGG ACTGTGGGGT CAGGTTGGCC CAGTGGGTGC CTGTACCCCG TGGATGGATG 360
GGGCTGTGCC CTGAGCTGGC GCAGGGAGGC GGGGACAGGG CGCTGGGCCA GGCTGGGCAC 420
CCAGGGTGGG CACTGGACCT CTGCCAAAAG CGGTAGCCAG CCCCTCAGCG GGGGTTTGGT 480
TACTGTCAAG TCTGGCAGTT GCCTTGTGGT TAGGGAGGGA GTCAGCCCCG AGCTCAGAGG 540
GAAGCCGCAA GAATGTGCTG TTGCCTGTGC CCGGGCAGGG GAGGCCGTCT GCCCAGGCCT 600
GTGCCCAGAG CAATCCCAAA CCCCATTACC AAAGCGCCGA GACTCTCTCA GAGTGGGGAG 660
GCTTCTTTGA GATGCCGCCT CCTCTGGGGC ACCTCCTGGG GGACTGCCAC CATCCCTGGG 720
AGGTGCCTGG GCCTGGGGCC GAGTCTGGGG AACCCGTCTA CTGTTGCTGC ATAGCGGATG 780
GGAAGCCCGG CACCATGGAG GGGAGGGCGG TCAGAGGTCA ACAGAGCAGG CAGCGGCTGG 840
AGCAGCGGTG TTGCCTCTGG GCCCTGAGAA GGCAAAGCCC CCTCAGAGCA AGCTGGCTTA 900
AAAACCCACC GTGCTCGCCG TACCTGTCCC ACAGGGGAGC AGGCGCTGAG GGTCCCCTCC 960
TGGGGCAGAG CCAGCCTTGG GAGGCTATTG GGGGTCGCAG TGATGGCTCT GTCTCCTGCC 1020
CCACGTGTCC CTGGCACGTG CAGGCTGTGG GGAACCCAGG GCAGAACTCA GGTAAGCCCG 1080
TCTGCCTCTG AGCCCCTCGC CCCATCCACC TAACTGCCCA GACAAGATGG GAGCTGTCCT 1140
GGCCCCCAGG CCCGGCCTGC CTCACCTGAG ATGGCCCTGC TGAAGCCACT ACCGTGGCTC 1200
CAGGGGCCTC TGAGCATGGC CTGCGCCGGC CCCGCCTTCC CAGGGGCCCT GTTTATTGTG 1260
TTCACCGCAG CAACAGCACC CCTGTCTGGA ACACGTAATA GGAAACAGAC CCCCTCCTGG 1320
CAGGGCCAGG CAGGCACAGG GGGCACAGAG CCCATGGCAG GGAAGCTGGG CCGTCAGGAT 1380
CCAGGCGCCA CAAGGGCCCA GGAGGCTGCG GCAGGGCTGG GAAAGAAAGA GGCTTCTCAT 1440
CACCCCCTCC AGACAGGCAG AGCCCTGAGA 1470