| Tag | Content |
|---|
EnhancerAtlas ID | HS130-02991 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:235090480-235093080 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NR2C2 | MA0504.1 | chr1:235091354-235091369 | AGGGGGCAGAGGGCA | + | 6.63 | | Nr2f6(var.2) | MA0728.1 | chr1:235092071-235092086 | GAGGTCATGAGTTCA | + | 6.26 | | RARA | MA0729.1 | chr1:235092071-235092089 | GAGGTCATGAGTTCAAGA | + | 6.12 | | Six3 | MA0631.1 | chr1:235091720-235091737 | GCAAATGATACCCTTTC | - | 6.12 | | ZNF263 | MA0528.1 | chr1:235091129-235091150 | GGAGCAGCTGGAGGAGGGGAG | + | 6.02 |
|
| | Number of super-enhancer constituents: 69 | ID | Coordinate | Tissue/cell |
| SE_00182 | chr1:235089787-235092321 | Adipose_Nuclei | | SE_00983 | chr1:235090315-235091537 | Adrenal_Gland | | SE_00983 | chr1:235092569-235093035 | Adrenal_Gland | | SE_01666 | chr1:235090775-235091665 | Aorta | | SE_01666 | chr1:235092553-235095108 | Aorta | | SE_02305 | chr1:235090797-235091817 | Astrocytes | | SE_04136 | chr1:235091089-235091897 | Brain_Anterior_Caudate | | SE_06052 | chr1:235092563-235095925 | Brain_Hippocampus_Middle | | SE_07547 | chr1:235089887-235092129 | Brain_Hippocampus_Middle_150 | | SE_09160 | chr1:235089274-235102029 | CD14 | | SE_13412 | chr1:235090132-235091861 | CD34_Primary_RO01536 | | SE_13412 | chr1:235092302-235095085 | CD34_Primary_RO01536 | | SE_14852 | chr1:235090111-235096258 | CD4_Memory_Primary_7pool | | SE_19577 | chr1:235090565-235091808 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_21117 | chr1:235090472-235092194 | CD8_Memory_7pool | | SE_21117 | chr1:235092380-235094348 | CD8_Memory_7pool | | SE_23314 | chr1:235090322-235090800 | Colon_Crypt_1 | | SE_23314 | chr1:235090805-235091803 | Colon_Crypt_1 | | SE_23314 | chr1:235092463-235096122 | Colon_Crypt_1 | | SE_23955 | chr1:235090350-235090759 | Colon_Crypt_2 | | SE_23955 | chr1:235090824-235091497 | Colon_Crypt_2 | | SE_23955 | chr1:235092554-235093067 | Colon_Crypt_2 | | SE_25800 | chr1:235089687-235101859 | Duodenum_Smooth_Muscle | | SE_26806 | chr1:235090349-235091700 | Esophagus | | SE_26806 | chr1:235092605-235093136 | Esophagus | | SE_27663 | chr1:235089063-235101555 | Fetal_Intestine | | SE_28576 | chr1:235088850-235101396 | Fetal_Intestine_Large | | SE_29689 | chr1:235090283-235092133 | Fetal_Muscle | | SE_29689 | chr1:235092238-235094048 | Fetal_Muscle | | SE_31235 | chr1:235090341-235091774 | Fetal_Thymus | | SE_31235 | chr1:235092263-235094078 | Fetal_Thymus | | SE_31572 | chr1:235090061-235091822 | Gastric | | SE_31572 | chr1:235091850-235096149 | Gastric | | SE_32492 | chr1:235088942-235092206 | GM12878 | | SE_33758 | chr1:235092170-235101690 | HCC1954 | | SE_34767 | chr1:235092103-235099043 | HeLa | | SE_36952 | chr1:235089804-235094553 | HSMMtube | | SE_40307 | chr1:235092364-235094852 | K562 | | SE_40653 | chr1:235089852-235091891 | Left_Ventricle | | SE_41640 | chr1:235092557-235093028 | LNCaP | | SE_42265 | chr1:235089721-235091735 | Lung | | SE_43462 | chr1:235092226-235096141 | MCF-7 | | SE_44805 | chr1:235090559-235091810 | NHLF | | SE_45558 | chr1:235090190-235094180 | Osteoblasts | | SE_47119 | chr1:235087515-235103374 | Panc1 | | SE_47599 | chr1:235090912-235091521 | Pancreas | | SE_47599 | chr1:235092519-235093108 | Pancreas | | SE_48697 | chr1:235089896-235091719 | Right_Atrium | | SE_50040 | chr1:235092229-235094403 | RPMI-8402 | | SE_50071 | chr1:235089709-235100691 | Sigmoid_Colon | | SE_51271 | chr1:235089831-235092066 | Skeletal_Muscle | | SE_51271 | chr1:235092438-235095754 | Skeletal_Muscle | | SE_51773 | chr1:235090507-235091828 | Skeletal_Muscle_Myoblast | | SE_51773 | chr1:235092334-235094038 | Skeletal_Muscle_Myoblast | | SE_52352 | chr1:235089712-235101497 | Small_Intestine | | SE_53330 | chr1:235089854-235092349 | Spleen | | SE_54553 | chr1:235090275-235096009 | Stomach_Smooth_Muscle | | SE_56068 | chr1:235090847-235091959 | u87 | | SE_56760 | chr1:235090862-235091499 | VACO_400 | | SE_56760 | chr1:235092552-235093115 | VACO_400 | | SE_59259 | chr1:235089283-235124733 | Ly3 | | SE_60969 | chr1:235059965-235155853 | HBL1 | | SE_61435 | chr1:234961094-235124239 | Toledo | | SE_62329 | chr1:235047040-235185428 | Tonsil | | SE_63542 | chr1:235090473-235091948 | HSMM | | SE_63542 | chr1:235092307-235094054 | HSMM | | SE_65393 | chr1:235090044-235091867 | Pancreatic_islets | | SE_65393 | chr1:235092372-235101616 | Pancreatic_islets | | SE_67736 | chr1:235090847-235091959 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr1 | 235090546 | 235090894 | | chr1 | 235091073 | 235091332 | | chr1 | 235091427 | 235091813 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I234953 | chr1 | 235089124 | 235101946 |
|
Enhancer Sequence | ATGGCTGTCT CCAGCCGCTC TGAGTAGCCA GCGGTGCAGC CAGCTGGTCT CAGATTTGGG 60
CTGTGATGAG TCTGGATGGC AGAAGAACAA GAGGGATGGG AAATTGAGGG AGGGCCTCAT 120
TGAAAGGGCT CACTCCAGGA GCCAGAAAAC CAGAAGAGCC TAAGGGACCC AGAGCTAGAG 180
TGAGACCAGA GATGCACAGT CCCCATGAGG ACAAAGAGCC CAGTGAGGAG AAAGGGAGAG 240
GTAAAAGGAT AAAAGAGTCA GAAGGAGTTT CAGAATCTAA GAGCTCCAAA AATAAACCTT 300
TCCCTTTGTA TCACTTTTCT CTTTTTACTT TAGTTGCTCT CAACTTGCTG CTTCCTTTTT 360
TTAAAAATTC TAGCAATTCT GCAGGAAACC AGAAGTGTGA ACCAAACACA GTAACTCTAG 420
GTGTTATGGC GCTGTCCTGC TCACCCTTCT TTTGGCCTAC TGGCTTCAAA GGTAGGCACA 480
CACACCGTCC CTTTTCTAAT GATCCGGTCG TGGATTCAGG CTCAGTAAGC CAAGACCACA 540
AGCAACAGGG CTTGGGCTCC ATCTGCCTCG GCTGCTTGCA GCTGCCTTCC AGGAAGTGCT 600
GGAACAGCAG AAGCAGCTAG CAGTGCGCTC AAGAAGTGGT CAGCAGTTGG GAGCAGCTGG 660
AGGAGGGGAG GCCAGTGAGC AAGTATCAGC TTGGGAAATA GGGTTTCGGC TGAACAAAGT 720
TCACTGCTGT TTTCTGAGAA AGCAGAACCT AGTGGAGCCA CCCTAGAGAA TAAGGAGAGG 780
AGCAACTGGA ACTGAGTGTT GGCTCCAAAC TTCCACGGCA TGATATGCTT GGCCACCCAA 840
TTGTGATCAG GGCCATTGTT GTTCCCCTGG GGGCAGGGGG CAGAGGGCAG GCCGCCGCTC 900
GGAGTAAAAA GGGAAGACAG ACAGGCAGTC CAAACACCAC CAAATGACAG AGATGCAGAC 960
CAAGACAAAA GGAAAAAACA ACAGAAGGGA TTTTTGTCCT TGAGACGTGC TATGCAAATT 1020
CTTTTCAATT AGTTTCCTAT TAATGATTCC ATCTTGAACA TTTAGAGCTG CTCAACCCAG 1080
GCAGCATCTA CGTTTTGAAG TAGTAAGTTC TCCATTCCTA GCAGAGTCGG AGGAGAAGCT 1140
CAGCTGTTAT CCACCAGAAA TTCTATTAAA AGGATGAAAG GTTGAACTAG ATGACTTCTC 1200
ATTCTGAAGA CTGTAATTCA GCAGAACTGA CTAATCCCTG GCAAATGATA CCCTTTCTGA 1260
GTATGCATGT GTCACTGAAA GTCACTCAGA CAAACCAGAC TATTTGTAAA TAGGTCTGAT 1320
TATCTGCAAA TTAGTTGATT GAAGGTTCCC GGGTATCAAG CAGGGCTTAT TTTAAGAAAT 1380
TAAGTTAATT TAGATAATAG CTGTGTTGAA AAGCAACAAG TTCAAAAACA ATTAAAAAGA 1440
ATGCAGCTTC CCTTTTATTT TTTTCAACTC TATATTTTCT TTTCAAATTG CTTCTAATAG 1500
ACCATCTGTT AAGAAAGCCT CTTTTGACCG GGTGCAATGG CTCACACCTG TAATCCCAGC 1560
ACTTTGGGAG GCCGAGGCAG GTGGATCACC TGAGGTCATG AGTTCAAGAT AGCCTGAGCA 1620
ACATGGTGAA ACCCCGTTTC TACTAAAAAC ACAGAAATTA GCTGGGCGTC GTGGCACGCG 1680
CCTATAAACC CAGCTACTCT GGAGGCTGAG GCACAAGAAT TGCTTGAACC CGGGAGGCAG 1740
AGGTTGCAGT GAGCTGAGAT AGCACCATTA CACTCCAGCC TGAGAGACAG AGCAAGACTC 1800
CATCTCAAAA ATAAAAAAAA GAAAGGCTCT TTCGTAAATT ACTTAAATAT GCTTAGAAGT 1860
CATTATTACT TTTTAAGTCA ATAGAAGTCT TTTTAGTTTA TCTAATAGCA TATTAATTCC 1920
TATGCTTTAT GTGTTTGTAC CCACACAACA CCCAGCCCTG CACCTAACAC ATAACAGGTG 1980
CTCAATAGAT GTTCATTGAA TAAATTGGTT GCAAAAACCG AGTGTATACA TTGAACATTT 2040
CTGCATATTG GTGATAATAA TAGTATTTTG AACACTTGTT CTATGCCAGT GACTGGGTCA 2100
AATAAACACT CAACCTCATA GTAATATCTG CGAAGTGATT GCTACATTAG CCCCATTTTA 2160
CAGATGATGC AACTGAGGCT GGTGAGAGGC AGAGCCAGGA TTCAAGGCCA GGCCTGTCCA 2220
ACTCCCGAGC CGAAGCTCTC AGCGAGGGTA TCAAACTGAA TCTGAATCCT CTTAGTTTAT 2280
CTATTTTAAA GTGCTGCATG TGGTATGTTC AGGAGACGAA AACTCTCTGA TGAGGCACGT 2340
GTGGATGGGA TGGCAGGGCT GAGAAGGCCG GCTCCCCCAC GGGGTGTGCA CAACCTACCT 2400
CCCCAGCTGT TTCTGCTACC GGCTGGGGCC TTCAACTCCA CCGCCTCCCC TCCCCCAGGC 2460
CCTAAATCAC TCTCAGGCCT TTTGTTCTTC CCCACAGCTG CTCAGCAAAT TCCTTGATTT 2520
GAAATTACGA TCACAGGTTG GAGTGCTACT TAAAATAATT TTGCCAAATG TTCCATCTCT 2580
CTGTGTTGAT GAATATAATG 2600
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