EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS130-00465

Organism

Homo sapiens

Tissue/cell

MDA-MB-231

Coordinate

chr1:27030990-27034410

dbSUPER

Number of super-enhancer constituents: 22
ID	Coordinate	Tissue/cell

SE_09344	chr1:27017976-27031496	CD14
SE_09344	chr1:27031734-27033748	CD14
SE_09344	chr1:27033909-27034976	CD14
SE_11056	chr1:27017938-27035197	CD20
SE_13430	chr1:27032258-27032909	CD34_Primary_RO01536
SE_14400	chr1:27032404-27033560	CD4_Memory_Primary_7pool
SE_25208	chr1:27032192-27032870	Colon_Crypt_3
SE_26497	chr1:27031949-27033811	Duodenum_Smooth_Muscle
SE_27066	chr1:27032508-27033335	Esophagus
SE_28496	chr1:27032196-27033729	Fetal_Intestine
SE_31811	chr1:27030850-27032108	Gastric
SE_31811	chr1:27032399-27033460	Gastric
SE_41215	chr1:27032323-27033208	Left_Ventricle
SE_42757	chr1:27032332-27033385	Lung
SE_48533	chr1:27032505-27033459	Psoas_Muscle
SE_49223	chr1:27030547-27031355	Right_Atrium
SE_49223	chr1:27032531-27033403	Right_Atrium
SE_50662	chr1:27031851-27033520	Sigmoid_Colon
SE_53177	chr1:27032193-27033604	Small_Intestine
SE_53629	chr1:27032252-27033469	Spleen
SE_60740	chr1:27018473-27033280	DHL6
SE_62586	chr1:27018122-27033655	Tonsil

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I026707	chr1	27033910	27034976
GH01I026705	chr1	27031860	27033705

Enhancer Sequence

GGTTGATGGG TTAGGTAAGC CTGCACATAT GCAGTCTGCC CATTTATTCA TAGAAATGGC 60
CTTTAATACT GTTTTTGGCC GGGCGCGGTA GCTCACACCT ATAATCCCAG CACTTTGGGA 120
GGCCAAGGTG GGAGGATTGC CCAAGCCCAG GACCAGCCTT GGGACCAGGC TATTAACATA 180
GGGAGACCCC ATCTTTACAA GACACAAAAA TTGCTGGATG TGGTGGTACG TGCCTGTAGT 240
CGCAGTTTAC TTAGAAAGCT GAGGCAGGAG GATTGCTTGA GCCCAGGAGG TTGAGGCTGT 300
TGTAAGCCAT GATTACGCCA GTGCACTCCA GCCTGGGCAA TGGAGCCAAG ACCTTGTCTC 360
AAAAAAAAAA AAAAAATTTG TTTTTTATTA GGTTACTATG GCCAAGCAGC TAACAAATGC 420
TGCTCACCAA TGCTTAATCC TTGTGGAGCC TCTGGAATAT AGTGATTTTG GTTTCTTTAC 480
CTGCTGGTCG ATCTGTGGTT GGGCCTTGGC ACTTCACCGG TCAAGGATCA TCAGTGGATG 540
CTTAACAGCT GAAGATGCAT GGCATGTCCA GTGCCAGGCC ACTGTAATGC TTCTACCTGG 600
AGAAGGATTG GTTACACTGC TCCAGTACAG AAGTACTGCA GACCTTTTTT TTTTTTTGAG 660
ATGGAGTCTT ACTTTGTCAC CCAGACTGGA GTACAGTGGT GCAATCTGGC TCATTGCAAC 720
CTCTGCCTCC CAGGTTCAAG CGATTCTCAT GCCTCAGCCT CCTGAGTAGC TGGGATTATA 780
GGCTTCCACC ACCATGCCCG GCTAATTTTT GTATTTTTAG TAGAGGTGGG GTTTCATCAT 840
GTTGGCCAGG CTGGTCTTGA ACTCCCAACC TCGGGTGTGA TCCACCCACC TTGGCCTTCC 900
AAAGTGCTGG AATTACAGGT GTGAGCCACC ACGCCCAGCC TTTTTTTTTT TTCCCCCCCC 960
CTCAAGTAAT GGTCCATGAC CTGCTGAAAG TACTGGAGTC TTGGATAAAC ATTCTGGTTT 1020
AGAAATACCT TTTCCACTTT TTTTGCCTTG CCATTTTGGC ATTTTGCAAA AGTGGGTTTT 1080
CAGTTACTCA GAATTGGGCA CCATAGTTAA CCTCCTATGG ATTACAGGTG TTTAGGGGCT 1140
TGAACTCTGA TCATTCCCAG GTTTTAGAGG AATCCAAGTT CGGGTGAATA TTGACTTAGT 1200
AGCCTTGAGT ATTCTTCCTG AAATTACCCC TCCTCTCCAT TTAAATGGAT GAAATTAGTT 1260
TTTTACTGAA TGTGAAGGGA CATCTGAATG AACTTCTGTT TGTTTTTGTT AGTCACTTGT 1320
GCATAGCTGG AATATTATCT TGGGACAGGT TGAGTCTATT TCCCAGTGGC TTCTGCATTT 1380
TCTAAGGGTG GACTGGAATG GGAAGAAGTC TAATGCCAAG AATGCATTCC AACATGCTGC 1440
AGAGTAGGAA ATTTGATCCC TAAAATGTTG ACTTAGTGTT GGTCATGGTA CATATTAGAA 1500
ATCACCCAGT AATCCAGGAC AGATTTTTGT CACCCTCCAG GAAGTTATGT TGATATAAAT 1560
ACTAAGGGGC TTTGGGTACT GAGCTAAGTG CTCTGCAGGC CCAAAGCGCT GCTTGAATTG 1620
CTACCCATAT GAAGAGGAAA TGTGCCATGT GCCTTTTTTT CTCTCTTTTG CATTTGGGCT 1680
TCCTTATGGC TTTGTTGCTT TTATGTTCCC AAGTCTGCAA AGTTAGATAT TAGACTTCCT 1740
CCTCCCTTGG CACTGGCAGA TTCATGATTT TCCATGGCTC ATCACTAGCA GCCAAGATTT 1800
TTGTATGCTT TTCTCTCTTA AACTTGTTCG TTTTCAGCTT GCTTGTTTAT AGGCATCTCT 1860
GTTAAAAGGA ACCCTTCTTT TCCCCTTAAG ATCTAGCACC AGGGGTGCTT GGGGGTTGTT 1920
GTGATATCAG TCAATTAAAA GCCCATTTGG TGTGTGCTTG GTGTTTTTAT TTTGCTCATG 1980
TTTTCTTTGA GGTCACAACG TGCTTGCCGG GCATGAGTGC CTTTGGGCCC AGCTGTTTAC 2040
TCTCAACTGC CGTGTACTTT GACTTTAAGA AAAGTGCAAA TTCAGCCACG TGGTAGAGGG 2100
ATTAAAGGCC ACATAGTGTT GGATGCTTCC TTTTGGAAGA AACAGATATA TCTTTGGGCT 2160
CTTCTTGCCC AGTGATTTCT CCTGTCTGGG GTAGACATTG TTGCTTTCTG TTGTCCTTAG 2220
AGAACAGGGC AGAAATGCTG GGAATTGGTT TATTACTGTG TCTCTTTGGC AAATATGTAT 2280
GTCTTTTTCT CTTGCCCTTT GGACAACATT CTGTTCTGGT CCTAAGGTGT TGGAGTTCAC 2340
AGGTTGATCT AGCGTTATGT GAAACTCTTG GTAATTTAGG TTTGGATAAC CGGCTTTTAG 2400
TCTCCAGATT TCTAACATTG TGCTTGTTTA GGAATTTAGG CTTCTAAAGA GAACCATATT 2460
ACAAAGCTTT TGGGGAACAA TTCTGTAGGT AGTTTATCTG TTCTTGGGTC ACAGATCCTC 2520
ACCAGGATCC TGACTTTTTT TTTTTTTTAG ACGGAGTCTT GCTCTGTCAC CCAGGCTGGA 2580
GTGCAGTGCA GTGGGGCAAT TTCAGCTCAC TGCAGTCTCC GCCTCCTGGG TTCAAGGGGT 2640
TCTCCTGCCT CAGTCTCCTG AGTAGCTGGG ACTACAGGCA TGCGCCACCG CGGCTGGCTA 2700
ATTTTTTTTT TTTTTTTTTT TTTTTTTGAG ATGGAGTCTT GTTCTATCGC CCAGGCTGGA 2760
GTCCAGTGGT GTGATCTCGG CTCACTGCAA CCTCCGTCTC CCAGGTTCAA GTGATTCTCC 2820
TGCCACAGCC TCCCGAGTAG CTGGGACTAC AGGCGCCTTC CACCACGCCC TGCTAATTTT 2880
TGTATTTTTA GTAGAGATGG GGTTTCATCA TGCTGGCCAG GCTGGTCTGA AACTCCTGAG 2940
CTCGTGATCT ACCCGTCTCG GCCTCCCAAA GTGCTGGGAT TACAGGCATA AGCCACCACG 3000
CCCGGCCTAA TGTTTGTATT TTTAGTAGAG ATGGGGTTTC ACCATGTTGG CTAGGCTAGT 3060
CTCGAACTCC TGACCTCAGG TGATCCGCCG GCTTTGACCT CCCAAAGTGC TGGGATTACA 3120
GGCGTGAGCC ACTGTGCCTG GCAAGGATCC TGACTTTCAA ATGATGGCCA CCATGCATTT 3180
GAGTACTTAT TATGTGCTAA GCATTATGCT TAGTCCTCTT GATGAATTTC CTAATTTAAT 3240
CTTCAAAACT GTATAGGAGG TGGGTTCTAT TATTAATCTT CCTCTTTTAC AAATGAGGAA 3300
ATAGAGTAAG ATAAGAAATT TGCCCTAGGG AAAATAGCTG GTAAAAGGTA GAGTTGGGTT 3360
TGTCTGACAA GGTAGACAAG GTTTGTCTGA CTCTTCAAAG GTATTACAAT CTAAAATACT 3420