| Tag | Content |
|---|
EnhancerAtlas ID | HS130-00444 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:25874970-25877560 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ETV6 | MA0645.1 | chr1:25877427-25877437 | AGCGGAAGTG | + | 6.02 | | KLF4 | MA0039.3 | chr1:25876312-25876323 | GGAGGGTGTGG | - | 6.32 | | Nr2f6(var.2) | MA0728.1 | chr1:25875058-25875073 | TGAACTCCTGACCTC | - | 6.22 |
|
| | Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
| SE_02010 | chr1:25875060-25879910 | Aorta | | SE_03472 | chr1:25876169-25876665 | Brain_Angular_Gyrus | | SE_04384 | chr1:25875509-25878227 | Brain_Anterior_Caudate | | SE_05146 | chr1:25875255-25899602 | Brain_Cingulate_Gyrus | | SE_05991 | chr1:25873945-25899913 | Brain_Hippocampus_Middle | | SE_06990 | chr1:25875392-25877046 | Brain_Hippocampus_Middle_150 | | SE_08141 | chr1:25875552-25880283 | Brain_Inferior_Temporal_Lobe | | SE_15269 | chr1:25874020-25879614 | CD4_Memory_Primary_7pool | | SE_16249 | chr1:25875203-25877364 | CD4_Naive_Primary_7pool | | SE_17633 | chr1:25869448-25897028 | CD4p_CD25-_CD45RAp_Naive | | SE_19031 | chr1:25874010-25893424 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_24457 | chr1:25875258-25875556 | Colon_Crypt_2 | | SE_24457 | chr1:25875584-25877457 | Colon_Crypt_2 | | SE_53664 | chr1:25874991-25896829 | Spleen | | SE_55600 | chr1:25876051-25876946 | Thymus | | SE_65397 | chr1:25875239-25877712 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 25875728 | 25875887 | | chr1 | 25875913 | 25876642 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I025547 | chr1 | 25874360 | 25877970 |
|
Enhancer Sequence | TGGGATTACA GGCGCCTGCC ACCACACACA GCTAATTTTT TTGTATTTTT AGTAGAGACA 60
GTGTTTCACC ATGTTGGCCA GGCTGTTCTG AACTCCTGAC CTCAAGTGAT CCACCTGCTT 120
TGGCCACCCA GAGTGCTGGG ATTACAGACA TGAGCTACCA CGCCTGGCTG AGGTGGATAC 180
TCCTATTGTC CCTGTTATTT ATTTATTTAT TTGAGACAAG GTCTCACTCT ATTGCCCAGG 240
CTGGAATGCA GTGATATGAT CATAGCTTAC TGCAGCCTCG ACCTCCTGGG CTCAAGGGAT 300
CCTCCTGGGT AGCTAGAACT ACAGGTGCAC ACTGCCACGC CCAGCTAATT ATTTTTTGTA 360
GAGACGAGGT CTTACCATGT TGTCCAGGCT GGTCTTGAAC TCCTGGCCTC AAGCAATCCT 420
TCCTTCTCAG CCTCCTAGCA CACTGGAATT ACAGGCATGA GCCACTGTGC CTGTCTTGTC 480
CCTGTTTTAA AGTTAGGACA CTGAGATCCA GGGAGGTTCA GTGACTATGA ACTCCACAGC 540
CCATAGCATA TTTTTCTCTT ACTGTGTAAG TAGGTACTTA GGAAATGGTA GCTGCTGCAA 600
TTTGTCATTT TAAAAATTAT TTTCTTTTGA TAACAATCTC AACAGCTTTG ACTTCTGAAA 660
TTTTCCTAGT ACTTTTCACG TCCAGAAACT TCTGGTGACG CTCCTGAGGG GATGAACCCA 720
TTTGTCAGAT AGAATTACAG CCCAGAGAAG CAGCTACACT CCAGGTCAGG GCAGAGCTTG 780
AGCCCTCTTC TGAGATGTTG TCACTCTGGC CTCTGAGGCC ATCTCCCCAC CAGGCTGGGG 840
GAGGCTGGAG GCCAGAGCCC CGGTTGGAGG CTCCCCTGGC CCCTGGGTTT GGCTGCAGCT 900
CTGATGTTGC AGACACACCA GCCAGGCAGG GTCTCTGGGA GCAGCAGAAC GGGCACAAGG 960
GCATTCAGCC CAGCTCTGAC TCCCGGGTGG TTGGGGGACC TTAACAAGGA AAGAACACGT 1020
GTTCACAGCT GTAATTTAGA CCTTAGACCA GGCATATGGT CTGTCCCCAG CTAACTCCAG 1080
CAGCAGGTCA TCTGTAAAAT TGCAACGTTA AAATAGCGCA GTCATTACCC ACTACAGGGC 1140
CAAAAATAAC TAGGACCGGA ACAGGGCTGT GCACTCAGGC CTGTATTTGC CCAGGGGCCT 1200
CTGGGAGCAC CTCCTGAAGC CGTGGGCTCC TCCCGGCAAT AAGGCCTCCG GCTGTGGCTG 1260
GCGAGTAGGG CGGGTGGCGG GTGTGGCCCT GAGCCCTACC AATGGGCCTT CACTGAGAGC 1320
TCCCAGGTGC TGGTTTCTGT GGGGAGGGTG TGGGCATGAG GGGCCTTACG CTCTAGTGAA 1380
GACATGAGTC ATGTGCACAG ACCACAGGAG GGAAGCAGCT TCCTAGAGAG AAAGGAGCAT 1440
CTCAGTGGGG CCTGGGAACA TGGGGTACAA GGGAGAAACA GGACCAGACT GGACGGCCAC 1500
ATTGGGCAGG CGCACGCTTC CATGCCAGGT CCTGGGGAAG CAGACATGAA TGGCAGGTAC 1560
TTTAAAGGGA AGAGACGTGT AGGCAGTGCT TGGCAGTGGG TGGTGTGGCT GCAGGAGGAA 1620
GAAGAGATTT ACAGTCAAGA AAGGCACCAA CAGCCCGCCC ACAGGAGGGA TGAGGCCCCA 1680
CTGGAAGGTG TACTGAGCAA CTGCGATGGG CCTGCCTCTC TGCTAAATTC TATAAACTTA 1740
TCCAAGGGTC ACAACAGCCC CCAGGAGTCA GAGCTGTTGT TTCCCCCATT TTAAAGATGA 1800
AAAACTGAGG TTCAGGGAGG GTAATGAGCT CACTCAAGAT GACTCAGACA TGAAGCATTG 1860
GAGCTGATAT CTTAGGATTA AGGCCTTGCT GTTAACCACG AGGCTATATT GCCTCAAAGG 1920
AGGCTTCCTG GAAGAGGTTG GATGTGTGGG GTTTGATCAA GTGAAGAAAG GGCATTTAGG 1980
ATAGAGGGAA CTACTTGAGC AAAGGCAAAG AAGTTAGACA GTAAATATTA CATTATTAGG 2040
AAGAAGCTCT GCATGGTTGG AGCTTCTTGG GGTAGGGGGT ATGTAGGGAT ATTGTGGGAG 2100
AAGAGACGGG GAAACTTAAA ATTCCCTCAC AGTCACTGGT CATTGTGGGG ATTGTCTATA 2160
GTGGACTGGG TGGGGTGAGG AGAGTCCCTC TGACTTGCCA TGTTACCTTG CACAGGTCCC 2220
ATCCCTGTCT GGGCTTCAGT TGTATCATCA AGTGAGGGGC TTGAGCTGAG GGCCTAAGGC 2280
TGATGAGTGG CAACCAGTCT GTAAGGACGT GGTTAGAGGA GGGGAAGGGT CAGGCCAGGG 2340
AAGGAGGAAT GCAGAAAAAT GCTGAACATT TCAGGGGTCA GGGAGGACTA GGGAATGTTT 2400
TGACAGCAGA GAGATCACCA GTGACCTTGG CAGGCTTTGG TTCTTTGGAA TGGAGGGAGC 2460
GGAAGTGACT TTGGAAAGGG GCCAGGAAAG GGCTGAACCA GAGGAAATGG GAGAATGGGG 2520
ACATGAAAAT GGGGGCTGGA GAGGGAGAGT GGAGAATGTT TGCCAGGGGT AGGGATGGAT 2580
AATGAGATGT 2590
|
