| Tag | Content |
|---|
EnhancerAtlas ID | HS130-00405 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:23902850-23905230 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gata1 | MA0035.3 | chr1:23902982-23902993 | ACAGATAAGGA | - | 6.14 | | HOXA13 | MA0650.2 | chr1:23905153-23905164 | GTTTTATTGGT | - | 6.32 | | Nkx3-2 | MA0122.3 | chr1:23905146-23905159 | ATTAAGTGTTTTA | - | 6.16 |
|
| | Number of super-enhancer constituents: 44 | ID | Coordinate | Tissue/cell |
| SE_01721 | chr1:23900657-23905229 | Aorta | | SE_02313 | chr1:23901876-23905526 | Astrocytes | | SE_02990 | chr1:23903287-23903795 | Bladder | | SE_03649 | chr1:23903331-23903843 | Brain_Angular_Gyrus | | SE_03649 | chr1:23903960-23904459 | Brain_Angular_Gyrus | | SE_04396 | chr1:23902891-23904726 | Brain_Anterior_Caudate | | SE_05716 | chr1:23903816-23905335 | Brain_Cingulate_Gyrus | | SE_06239 | chr1:23900696-23905116 | Brain_Hippocampus_Middle | | SE_07293 | chr1:23902637-23904795 | Brain_Hippocampus_Middle_150 | | SE_08579 | chr1:23902794-23905344 | Brain_Inferior_Temporal_Lobe | | SE_10300 | chr1:23899372-23906111 | CD19_Primary | | SE_11050 | chr1:23898822-23908436 | CD20 | | SE_18996 | chr1:23902922-23905455 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_26335 | chr1:23902515-23905797 | Duodenum_Smooth_Muscle | | SE_27258 | chr1:23902880-23904675 | Esophagus | | SE_27884 | chr1:23903017-23904621 | Fetal_Intestine | | SE_28880 | chr1:23903194-23904813 | Fetal_Intestine_Large | | SE_29676 | chr1:23901788-23905238 | Fetal_Muscle | | SE_31953 | chr1:23902935-23903813 | Gastric | | SE_31953 | chr1:23903835-23904596 | Gastric | | SE_34689 | chr1:23902272-23905407 | HeLa | | SE_37153 | chr1:23901250-23906299 | HSMMtube | | SE_38016 | chr1:23903113-23904896 | HUVEC | | SE_38999 | chr1:23901867-23905446 | IMR90 | | SE_41075 | chr1:23901556-23905295 | Left_Ventricle | | SE_42328 | chr1:23901634-23904721 | Lung | | SE_42328 | chr1:23904726-23905233 | Lung | | SE_44435 | chr1:23902863-23905477 | NHDF-Ad | | SE_45797 | chr1:23901058-23906146 | Osteoblasts | | SE_48755 | chr1:23902917-23904674 | Right_Atrium | | SE_50077 | chr1:23902728-23906171 | Sigmoid_Colon | | SE_51741 | chr1:23901781-23905632 | Skeletal_Muscle_Myoblast | | SE_52549 | chr1:23902842-23905170 | Small_Intestine | | SE_53706 | chr1:23902697-23905306 | Spleen | | SE_54840 | chr1:23900793-23905744 | Stomach_Smooth_Muscle | | SE_55341 | chr1:23903385-23903804 | Thymus | | SE_55341 | chr1:23903829-23904379 | Thymus | | SE_56054 | chr1:23901526-23905401 | u87 | | SE_58372 | chr1:23873313-23964782 | Ly1 | | SE_63528 | chr1:23901642-23905713 | HSMM | | SE_68324 | chr1:23879596-23905390 | TC32 | | SE_68325 | chr1:23879596-23905390 | TC32 | | SE_68477 | chr1:23874949-23904689 | TC71 | | SE_68478 | chr1:23874949-23904689 | TC71 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 23904600 | 23905142 | | chr1 | 23903714 | 23904323 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I023572 | chr1 | 23899427 | 23906089 |
|
Enhancer Sequence | CTTTCCGTGT TTCCTGGGTA AGCTTGTTTA TATATTTTTA GCAAACATTC ATGTAACACT 60
ATGTGCCAGG CACCATTCTA AGTGCTTTAC AAATGTTTAT TTAGGTAACA GAGGTACTGT 120
TGCCTCCATT TTACAGATAA GGAAACTGAG ACACAGAGAG GCTAATTTGC CCAAGACCAC 180
GTGGCTAGCG AGTGGCTACA CTTTCTGAGC CTCGGCTTTC TTGGCTGTTA AATTGATATG 240
TATATACAAG CGCCCTCTGC ATAGCAGGGC TTCTCAGACC CAACACTATT GACATTTTGG 300
GCTGGATAAT TCTTTGTTGT GAGGCTGTCC TGTGCATTGC AGGATGTTTA GCGGTATCCC 360
TGGCCTCTAC CACATAGGGT ATTCACTGCC AAGAGATGCC AGTAGCAACT CCCACTCAAG 420
CTGTGACAAA CCTAAAATGT CCCCTGATCT TGCCAAATGT CCTCTGGGGG CAAAATCAAC 480
CCTAGTTTAG AACCACTGCC TAATAGGATC CTGGGGAGGA TTAAATGAGC TATTTCATAT 540
AAAATACCTT CCGGCAATCC CTTCCCCATT CCTTCCATAA CTCTATGGTG AGTTCTAACT 600
CCTCAGAACC CTCTTGTTCT TTCTGTTCCT CTACTGTTTG GAAAATGTGC CCACCTATGG 660
AGACTGGGTG CTTGAGAGCT TCTTGCAAAT CCAAAGCTGT TCCAGGAGCT AGACCTGATT 720
CCAGTCCTGT CATTTCCACA GACATGCTGT GGGACCTTGG CTGAAGTCCT TCCCCTCCTT 780
GAGCCTCGGT TTCCCCATGT GTACGAGGGG GCTGACCCAG AAGCTTTCCG AAAGGTCTTC 840
TCACTGCAGG AATCAGTGAC TGGGTGATTC ATACCAAGTG CAAATTCCCC TCACAAAGTC 900
CAAATTCTTC CAGCGACTTA GTCATTCCAG GGTTTGAACT TTCTCGCAAA AACCATTTGA 960
AAAATTCTTC CAGCTTAAAA AAAAAAAAAA AAAGCTATTA AAAGAAAGTA AAAGTTTCAA 1020
AACCAAATCC TAGGCAAACA ACCCTGAAAA CAATACACAC ACATACATAT ACATACAGCA 1080
CCCAAGGTAG CTCTGAGAAC AGGATATGAA ACCTTGCAGG CCGGCACTAA GAAATGATTC 1140
ACAGGCCTTT GAGATGCTTC TATTTCAAGA CACAGTCCAC CCACTGGATC TGGTGGCTCC 1200
AAAAACAAAC TTTCAGCTGC TGTTTCTTAT CGCAGTGTGG TTCGCCTGGC CAGTATCCTT 1260
GGGTCTCAAG AGCTCCAGAC AGAAGACAAG GTTGAGTCCT GTGAATTCCC TTTCTGTTCT 1320
ATTTCAAGCC TCAAGCTGCT GGCTTGTTTA AAGAAAGTCT TTTGCATCCA CCTTTTGGTT 1380
GGCTGACCCG AGTTTAAAGC AACATAGCCT AATGGGTTCG TAGCACAGCC TGCGAATTCA 1440
TAATTTTAGT TTAGCAAGGC CTCTGTGTGG CTCCAGCAAG TCCTACTGGA TCCTGGGCTG 1500
GTCATTCTAG AAGCTGTCTC CAGCTAAACA ATCCTGCCTG GCTTTCCTTA TACATATCAA 1560
TATTATACTT GCCCTAGGCC AGGATTAAGA ATTTTAGCAC AAATTCAAAA TTTCATGCTT 1620
TTATGTAAAA TAGAAATATA AAAGTAATTC ATTCGATGAA ATGCTTACTG AGTGCTCACT 1680
ATATGCCAAG CACCAGCAAT GTACTGGCGA TAAAATACAG CCCCTGCCTT CAGGAGCCAC 1740
ATTGAACAGG AAAAGCAGAC AATCTAAATA TACATAGTAG AAACACATGG AACTATTCCC 1800
TATGGGAAAT GCCCTGCATA AAAAGTGATA CCAAAGTTGG AGCAAAATTG AAAGAAATGC 1860
AAATGCTTGT GATACGGTTA AGTACATTTT CATCTGTACT TACCCTTGAT TTTGTTTTAG 1920
ATTTAGAAAA TCTTGAACTT TCACTGTTGC TTCATTTGCC CTCCAAAAAT CCAGAATCTT 1980
ACAGAAAGGG TCAGTGTCTG GATCAAACAT GTTTCTTATC TAATTTCCTT GCCCCAGTTT 2040
TTGTTTATGC CATCATTGCT GCATGGAGTC CTCCCTCCTC TCCTTGTGTA TCCTCCAAGT 2100
TCTGATGCAA AGCCCACTTC CTCCAGGAAG CATTCGCAGA CCCATCTGGC CACATCCTCG 2160
CTGTTCTCTA AACACACATA TCTCATGCTC TTGACTTGGC CTTTAGCCTG TCCTGCCTTA 2220
TGATCTCTCT TGTACTTCTG TCCTGAAGTT TTATCTAACT TATGAATTGG GGGAAAGAGG 2280
ACAGGCACTG ACATTTATTA AGTGTTTTAT TGGTGACGGG CATTTTGCTA GCTCTTTACT 2340
GTATATAATG TGCCTGGTAT GTAGAAGATG TTCAATAAAT 2380
|
