| Tag | Content |
|---|
EnhancerAtlas ID | HS130-00228 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:16493570-16494910 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| PLAG1 | MA0163.1 | chr1:16494542-16494556 | TCCCCTTGGGCCCC | - | 7.12 | | RFX1 | MA0509.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | + | 6.38 | | RFX1 | MA0509.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | - | 6.4 | | RFX2 | MA0600.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | + | 6.6 | | RFX2 | MA0600.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | - | 6.73 | | RFX5 | MA0510.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | - | 6.26 | | RFX5 | MA0510.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | + | 6.27 | | RREB1 | MA0073.1 | chr1:16494145-16494165 | GGTGGGGGAGTGGGTGGGGG | - | 7.01 | | ZNF263 | MA0528.1 | chr1:16494579-16494600 | TCTCTCCGCCCCTCCTCCCCA | - | 6.12 | | ZNF263 | MA0528.1 | chr1:16494004-16494025 | GGAGGAGAGGCAGGTGGGAGG | + | 6.37 | | ZNF263 | MA0528.1 | chr1:16494576-16494597 | CTCTCTCTCCGCCCCTCCTCC | - | 7.1 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_23091 | chr1:16493730-16494938 | Colon_Crypt_1 | | SE_23751 | chr1:16493699-16494633 | Colon_Crypt_2 | | SE_24743 | chr1:16493660-16494922 | Colon_Crypt_3 | | SE_26540 | chr1:16493665-16496410 | Esophagus | | SE_31527 | chr1:16493631-16494622 | Gastric | | SE_34268 | chr1:16493420-16495012 | HCT-116 | | SE_34628 | chr1:16493224-16496455 | HeLa | | SE_47150 | chr1:16493248-16496088 | Panc1 | | SE_56795 | chr1:16493661-16494984 | VACO_400 | | SE_57357 | chr1:16493697-16494611 | VACO_503 | | SE_57939 | chr1:16493722-16494629 | VACO_9m | | SE_65472 | chr1:16493525-16494995 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I016167 | chr1 | 16493630 | 16496219 |
|
Enhancer Sequence | TGGTATTACA GGCACGCGCC ACCACGCCTG GTTAATTTTT GTATTTTTAG CAGAGATGGG 60
GTTTCACCAT TTTGGCCAGG CTGGTCTCGA ACTCCTGACC TCAGGTGATC CACCTGCCTC 120
TGCCTCCCAA AATGCTGGGA TTACCGGCAT GAGCCACTGT GCCCGGCTTC CGTTCTTCCT 180
GATTACTTAA GAGGGGCCTG ACTAATGCCC AGCATGGTTG GGGACCCAGG CCCCTCAAGC 240
CCTGGAAGTC CCTTGCCTGG GGTCATCCAG TCTCCTCCCT CAAAGGGCTC TCACTCCCCA 300
CCGCCGCTCC CTCTCCTCTT CCTGCTGCTG AGAGACGAGA GACCAGCAGA AAGAGACTTG 360
GAGAGACGGA GACACAGAGG CAGATGGAGA ATGCTGGGCG CCCGGGAAAG CCCAGGAAGG 420
AGCCCGGGCC ACGTGGAGGA GAGGCAGGTG GGAGGAGGCA GGAGAGAGCA AGGCTGCCCA 480
GGACAATGGA GCGGGACCGG AGGAGACGCG GGGAGGGACG CGGGCCAGGG GTGCGGTGGG 540
GGGCACGGGG TGGAACTCCG GGTCCCGTAG GGCGGGGTGG GGGAGTGGGT GGGGGGATGG 600
CCCACCTGCC GTGGGAGCGG GTCCGGAGGA AGCTAGGGTC TCGGGGTGGG AAGTGCTGTG 660
TAGAAGCGAG CGCAAGAGGC GAGAGGAAGC GCGGCGGGGC GGCCCCTGTC CCAGCCTCAC 720
CCCCATCCCC CCAAGTCTCG CACCCCGGTC CGCCCCAGCT TCCGGCTCCG CAGGTGCCGC 780
CTTTGAGGGC CGCCGCTCGC AGTTTACCGC GGAGCCGGAG CCAGAGCCCC TTCCCCGCGG 840
CGAGGAACTG CCTCTGCGTC TCGTAAAAGG GGTCTGGGCC TGGGGGGCGG CGGCCTCCGT 900
CGCCATGGAA ACCGGGGCGG GGAGGCGGCG GCCCGGAGAG CCCCATGCAC TTTGCATACC 960
ATTGCAGGTT CCTCCCCTTG GGCCCCGCCA GCCTCGCTGG GCCCGCCTCT CTCTCCGCCC 1020
CTCCTCCCCA AACCCATCAC CCTTGCCTTT ATTTGTCTTA AATTTATTTT AAAATGTATT 1080
TATTTATTTT TTTCAAACAG GATCTCGCTC TGTCACCCAG GCCAGAGTGC AGTGGTGCGA 1140
TCATGACTCT CTACAGCCTT CCATCTCCCC AGGCTCAGGT GATCCTCCCA CCCCAGTTTC 1200
CCAATAGCTG GGACCACCAC GCCTGGCTAA TTTTGTGTGT GTGTGTGGTG ATGTCGCCCT 1260
CTGTCACCCA GGCTGGAGTG CCGTGGCCAG ATCTTGGCCC ACTGCAACCT CCGCCTCCCA 1320
GGTTCAAGCA ATTCTCCTGC 1340
|
