| Tag | Content |
|---|
EnhancerAtlas ID | HS130-00047 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:2186800-2187820 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| GATA2 | MA0036.3 | chr1:2187603-2187614 | TTCTTATCTGT | + | 6.14 | | Gata1 | MA0035.3 | chr1:2187603-2187614 | TTCTTATCTGT | + | 6.62 | | NR3C1 | MA0113.3 | chr1:2186846-2186863 | TGGAACACTGTGTCCTG | + | 6.06 | | NR3C1 | MA0113.3 | chr1:2186846-2186863 | TGGAACACTGTGTCCTG | - | 6.14 | | NR3C2 | MA0727.1 | chr1:2186846-2186863 | TGGAACACTGTGTCCTG | - | 6.28 | | NR3C2 | MA0727.1 | chr1:2186846-2186863 | TGGAACACTGTGTCCTG | + | 6.35 |
|
| | Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
| SE_03761 | chr1:2186951-2187914 | Brain_Angular_Gyrus | | SE_05718 | chr1:2186119-2189208 | Brain_Cingulate_Gyrus | | SE_07454 | chr1:2186119-2189367 | Brain_Hippocampus_Middle_150 | | SE_08491 | chr1:2185789-2189149 | Brain_Inferior_Temporal_Lobe | | SE_08969 | chr1:2186796-2187034 | Brain_Mid_Frontal_Lobe | | SE_08969 | chr1:2187324-2187728 | Brain_Mid_Frontal_Lobe | | SE_11007 | chr1:2184548-2192323 | CD20 | | SE_12005 | chr1:2184665-2189009 | CD3 | | SE_15942 | chr1:2185651-2188669 | CD4_Naive_Primary_7pool | | SE_16427 | chr1:2185351-2189136 | CD4_Naive_Primary_8pool | | SE_17042 | chr1:2184540-2189098 | CD4p_CD225int_CD127p_Tmem | | SE_17322 | chr1:2181525-2189193 | CD4p_CD25-_CD45RAp_Naive | | SE_17845 | chr1:2181649-2192081 | CD4p_CD25-_CD45ROp_Memory | | SE_18345 | chr1:2184333-2191921 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19191 | chr1:2185876-2189148 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20071 | chr1:2184982-2189278 | CD56 | | SE_21247 | chr1:2185434-2188617 | CD8_Memory_7pool | | SE_21558 | chr1:2185341-2189061 | CD8_Naive_7pool | | SE_21979 | chr1:2185169-2189317 | CD8_Naive_8pool | | SE_22376 | chr1:2182855-2189180 | CD8_primiary | | SE_41586 | chr1:2184798-2187019 | LNCaP | | SE_41586 | chr1:2187683-2188254 | LNCaP | | SE_46124 | chr1:2186130-2189227 | Osteoblasts | | SE_62490 | chr1:2120386-2191742 | Tonsil |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I002253 | chr1 | 2184631 | 2191030 |
|
Enhancer Sequence | GCTGATTAAT ATGACTGAGT GGTGTCTTCT GACCCCATTT CTTATCTGGA ACACTGTGTC 60
CTGACTTCAT TTCCTGTCTG GAGCACACTG TCCTGACCTC ATTTCCTGTC TGGAACACAC 120
TGTGTCCTGA CCTCATTTCC TGCCTGGAGC TCTCTGTGTC CTGACCTCAT TTCCTGTCTG 180
TGCCGCTCTG TCCTGACCTC ATTTTCTGTC TGTGCCACCC TTTGTCCTGA CCTCATTTCC 240
TGTCTGGAAC ATGCTGTGTC CTAACTGCAT TTCCTGTCTG GAGCTCTCTC TGTCCTGACC 300
TCATTTCCTG TCTGGATCTC TCTATGTCCT GACCTCATTT CCTGTCTGGA ACATGCTGTA 360
TCCTGATATC ATTTCCTGTC TGTGCCACTT TGTCCGGACC TCATTTTCTG TCTGGAGCAC 420
TCTGTATCCT GACCTCATTT CCTGTTTGTG CCACCCTTTG TCCTGACCTC ATTTCCTGTC 480
TGGAACATGC TGTGTCCGGA TTGCATTTCC TCTCTGGAGC TCTCTCTGTC CTGACCTCAT 540
TTCCTGTCTG GAGCCAGTGA CCTCATTTCC TGTCTGTGTC ACTCTGTCCT GACCTCATTT 600
CCTGTCTGTG CCACTCTTTG TCCTGACCTC ATTTCCTGTA TGCAACACAC TGTGCCCGGA 660
CTGCATTTCC TGTCTGGAGC TCTCTCTGTC CTGATCTCAT TTCCTGTCAG GAGCACTCTG 720
TGTACTGACC TCATTTCCTG TCTGTGCCAC TCTTGTGTCC TGACCTCTTT TCCAGTCTGT 780
GCCACTCTGT GTCCTGACCT CATTTCTTAT CTGTGCCACT CTGTGTCCTG ACCTCATTTC 840
CTGTCTGGAG CACTCTGTCC TGACCTCATT TCCTGTCTTG TGTCCTGACC TCATTTCCTG 900
TCTGGAGCTC TCTGTGTCCT TACCTCATTT CCTGTCTGTG CTGCTTTCTG TCTTGGAGTT 960
GCGTGCCTGA CCTCATTTCC TCTCCACTGT GTGTTCCTGG AGTTAGGCAT CATCTTGGTT 1020
|
