| Tag | Content |
|---|
EnhancerAtlas ID | HS130-00044 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:2165160-2166540 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SOX10 | MA0442.2 | chr1:2166223-2166234 | TTCTTTGTTTT | - | 6.62 |
|
| | Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
| SE_01294 | chr1:2159376-2166664 | Adrenal_Gland | | SE_03761 | chr1:2164821-2165440 | Brain_Angular_Gyrus | | SE_03761 | chr1:2165450-2166008 | Brain_Angular_Gyrus | | SE_05718 | chr1:2160150-2166256 | Brain_Cingulate_Gyrus | | SE_07454 | chr1:2160083-2167777 | Brain_Hippocampus_Middle_150 | | SE_08491 | chr1:2160251-2166506 | Brain_Inferior_Temporal_Lobe | | SE_08969 | chr1:2165360-2165513 | Brain_Mid_Frontal_Lobe | | SE_11007 | chr1:2160050-2168251 | CD20 | | SE_17322 | chr1:2160103-2173005 | CD4p_CD25-_CD45RAp_Naive | | SE_17845 | chr1:2160096-2171778 | CD4p_CD25-_CD45ROp_Memory | | SE_18345 | chr1:2160148-2167869 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19191 | chr1:2160122-2166646 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20071 | chr1:2165001-2167367 | CD56 | | SE_27275 | chr1:2158012-2166662 | Esophagus | | SE_32363 | chr1:2157770-2167811 | Gastric | | SE_41586 | chr1:2160128-2166181 | LNCaP | | SE_43103 | chr1:2160113-2167961 | Lung | | SE_46124 | chr1:2160354-2166625 | Osteoblasts | | SE_54234 | chr1:2157957-2167755 | Spleen | | SE_62490 | chr1:2120386-2191742 | Tonsil | | SE_68979 | chr1:2164680-2166097 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | TCTGGGGAAT GACTGAGCTT GTGGAGGCCA GGAAGGGGTT GCTGGGCTTG GAGAGCCTCT 60
GGGGAGGAGT TGTGTTTTGC TCTTTGCTGT TTTAAGCTGA AATGATCACA GGAAGGGACA 120
GCATCAAGAG TTTCTTTCTG GGACACCCCT CACTCAGCTC AGCGGCCGTG TGTGGGTTTG 180
GGGCTGTGCT CTCCCAGACA CCCTCAGGTC CGGGGAGCAC TTCGGGGGCT ATCTGTCCCT 240
TTGTCCACCA GCTTCCTTTG GAAAAAGTGT TTGCTGCAAG TGTTTTTCTC CAGCTTTTCG 300
TGGGGTTCCC TGTAGTCTTG GGCCATGCTC TGGGGTCAGG CTCCCGGCAG GCCCTGGTCC 360
CCGTGCAGAA GGCCAGGGTC TGCGGGTTTG GGCTGGTCTG CCCCCCAGGT GAGGGTTCCG 420
GAAAGACGGC CGGCTGCTGA GTCTTCTCAA GCAGGGGAAA CAGCAGCTCG AGAGTGGTTC 480
TTGACCTCTG CCCACCCCAG CTGGCTGTGC ACGGACTGGG GAGGGCATGG GCAGCTGCCC 540
CCAGGTGGCT TCTGCAGGGA GCAGAGCTTA GTGGTCATTT TCCCGGCATG GTCTGTCATC 600
CGTCTGTCTG GGACCCCTCT GGGAGCTGGG CTGGGTCCCT CGCCTTCTGG GGCAGCAGGG 660
TCACGGTGGG GGGGCTAGTC CTCTCTTTCA GCATCTTGTT TCTCAGCCGT CCCTGCGGCT 720
ATTTGTGCAA TGTCTGTCTG TCTGAGTCTC CGGGTGAGGG CAGACAGGAT ATGGTGCGAG 780
GAAGTCTGGG GTAAGTGTGA GCCGAACCCC GCCCTGGAGT CTCTCGGGGT TGTGGGGCCA 840
CAGCCCCAGC TTAGGTTAGG CCTTCACTGC TGCTGGCAGG GCCTCCAGAG AGAAGGCGGT 900
GGTTCCGGGG CCTGGGCCCT GACTGTCTGG CAGGAGGTGT CCACGCCGGC GGCCCGGCTC 960
TCTGTGGCAA TAATGTGTCT CTTTCTAAGG ATTGCGAAAG TTGAGGGAGG ATTTCTCCAC 1020
TGGAAGAATT ATGCAAGCTT CAACTGAAAT GTTTTTAAAA AGTTTCTTTG TTTTGAGTCA 1080
AAATACAGAA GGTGAATTAT TTCCCTAATA TCTGGGAGAG CTGGAAAAGA AGGCCCCTGT 1140
CCTTATTCTT CAGGGCTCTT CCCCTCCTGA GCAGTGGTCA CCAGGCCAGG GTGTCATGGA 1200
GGGGGGGCTG CCTGGGGACC AGCTCTTTAC ACCTGGCCTC CAGAGCGGGT GGTAGGGCGG 1260
CTCCTTCCTG CCCTGCCCTG GCTGTCACCC TCGTGGTCTG GAGCAGGGTT TTTTTTTGTT 1320
GTTATTTTTT TTTTTTTTTG AGACAGGGTC TGTTTCTGTT GCCCAGGCTG GAGTGCAGTG 1380
|
