EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-03978

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:234882240-234883190

Target genes

Number: 10
Name	Ensembl ID

RP5	ENSG00000235605
C1orf31	ENSG00000168275
TARBP1	ENSG00000059588
RP4	ENSG00000228830
IRF2BP2	ENSG00000168264
SNORA14B	ENSG00000207181
TOMM20	ENSG00000173726
RBM34	ENSG00000188739
ARID4B	ENSG00000232686
GGPS1	ENSG00000152904

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_33532	chr1:234880980-234883367	H2171
SE_47205	chr1:234878039-234889090	Panc1
SE_63435	chr1:234845326-234887436	NCI-H69
SE_65556	chr1:234882353-234883132	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I234743

chr1

234878795

234883249

Enhancer Sequence

AGTGACTACG CAAAGTGACA AAGACAACAA TTTATATTTG GAACAGCTAG TATTGGGTGA 60
TGGGCTGATT GGTTTGATGG AAGCCAGGTT GTCACGGACT GAAAAGGAAG CAGGTGGTAG 120
ATAAATGGAG GGAGCAGTGG ATGATTCATT CAAGTCATTT AACACACTGT CTTGGGAATC 180
ATGTGCGCAC AAAAGCAAAC AAACTTTTTG GGAGATTCCA AATTAGGCAG TTGGGTCTTG 240
GAAAGAGGCC CCCCATGTGG GAAGCTCGAG CCCCCTCCAG AAGGCTCTTC AGAAGCTGTG 300
TTAGAACAGT GTGTTTCTCA TGGTCGGTCC CTGACTCATT ATCCCTGGTT CCTGGTTATA 360
CAGGATTTAC CTGAAGCAAA ATGACCACAA AGGCGAACTC CTCCAGGCCA TCTCCTCTTG 420
AAGTCCTCTT TGTTCACAGC AAGGCCCCAG GTCACAGTGC ACAGCCTGCC TGGGCCTGTC 480
TGTCCAGGAT CCAGCCCAGG CTGAGAAGCC CTGCAGCAGG CAGAAAAAGG AAGCCTGAGG 540
TTTGAGGAGA GCGCGGGGAG GGTGGAATGG AGCCAGAGGC CGTGGTGCCT TGGAGGCCCA 600
GAGCCATGAG TCCCGCACCC TCATGGAAGC AACGGAGGGA TCCCTCCCGG TTCTCAGTGC 660
AGACAACTTC CTTTCCGACT GTGGCCCTGA GGATCAGAGA AGAACACCTG TCTACAATGG 720
CAGAAAGCTT AGGGATTTAC CTCTTCAACT ACCTCTTGTT ACAGAAGAAA AATCTGACTC 780
ACATGTGATC ACAGCAAAAC AATCTGAATG AGACCCCTCT TCTGATTTAT TCTAAGCCCC 840
CTCTCAGACT GCCCCTAGGC CAACAGGGAG TTGGGGATGG GGAGTGAAAG AGTTTTAGAC 900
AAACTGATTG GTTCGGCAAC ACAGTCTTCC GGCAGAATTC TTACTCCTTA 950