Tag | Content |
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EnhancerAtlas ID | HS129-03808 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:230306880-230308480 |
Target genes | |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CDX2 | MA0465.1 | chr1:230307921-230307932 | AGGCCATAAAA | + | 6.02 | JUN | MA0488.1 | chr1:230307095-230307108 | ATTACATCATTTA | - | 6.1 | JUND(var.2) | MA0492.1 | chr1:230307094-230307109 | TATTACATCATTTAA | - | 6.05 | Twist2 | MA0633.1 | chr1:230307278-230307288 | ACCATATGTT | + | 6.02 |
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| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_25348 | chr1:230301904-230307084 | DND41 | SE_39366 | chr1:230304706-230307060 | Jurkat | SE_51527 | chr1:230304663-230308351 | Skeletal_Muscle | SE_58501 | chr1:230239434-230311477 | Ly1 | SE_66256 | chr1:230304706-230307060 | Jurkat | SE_67996 | chr1:230293025-230385938 | TC32 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I230169 | chr1 | 230304966 | 230308464 |
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Enhancer Sequence | TTGAAGAATT AGAAATAAGT CCTTCTGCTT CTCCCATGGG TCACTTTATA GGGAAAATGC 60 TTGATCAGGG GAGGTCTTGG TCTTTAGCGG GAAACTAAGT CTACTCTGTA AAAATTTGCT 120 TTCGAGTGAA CAGTATTTTA GTTAGTTTGT AATGTCTTAG CTTTGCAGCT TAGCTTAGTC 180 TTACCTTTTG AGAAATGGGC TGTGAAATAT AAATTATTAC ATCATTTAAA AATTTCTGGC 240 AACCTGTTTT TTTCCCCAAA ACTTGAGGGT TGCTGTGTGG ATTGGCTGTA GTGGTAATTA 300 CTGAAAAGTC ATCAAATAAC AGTGAAAACT AGACAACTGA TTAGAAGGGA ATCAAGTAGT 360 CATTCAGATG GTATTTTCGG TAATTTAATC TGCCTCTGAC CATATGTTCT AGTCAGCTGA 420 AATAATTTAA CAGTGACAAC ATATATTTCA GCAAGCAGAG ATTAAAAACA GCCCATTTAT 480 TTTCTGTTTT CTCCCGCAGT AATATTTTTA TGTCTCCGTT AACAAATATG ATGTTCGCCA 540 TTTAAATTAT ATGGAAGCAG CTTTGGATGA TTTAGCAATA TACATAACAT TTATTCTTTG 600 TTATTATCTA GTTTTATGTA TGTAAGCATG TTTATTTTAG TGGTGTTTCA TAATTCAAAA 660 ATGTTACCAG AGGTGGTAAT TGTATTTATA TTGGACATGG GTAAGACATC AGCGTGAGAT 720 GAAGCCACAT TTTTGCTGCT TTTGTGACTC AATTCTTGGG CTTCCAACAC CTCACAGCCC 780 CTGCCCCCCA CCCCTGTCCC ACACAAATGA CTGGCTGGGT GCAGCAGTCT CTGCCACTAG 840 CAAGCCTTAT GGCATTGATA AATGTAGTGG TTTTAGAATA TTCTAAATAT TAACCAATTT 900 TTTTTATTAT CCTCCTCTCA AAACTGGAGG CTAGTCTCAG CTCCACCAAA CCCGATTTCA 960 CGTGAGCTGG ACATGGTGAC ATGGTTCATT ATTTCTTATG AACAGACTGT GACAGGGCAA 1020 CAGTGAGTGA TTTCCAAGAC TAGGCCATAA AAGGCATCAC CGTGTTTCCC TTGCTCTTGT 1080 ATGTGCCCTC TTCCTCATAT TCACTGGGGA AGCCAGCCGC CTCTTGGGAG GACACTTAAG 1140 CAGCCCTACT GGATGGGCCC CAGTGAGGAA CTGGGGCCTC CTGGCCACGT GAGTTACCCA 1200 TCTTGGAAGC AGACCCCAGC CCTAGGCAAA CCTTCAGAGA ACAGCAGCCC TGGCCGAAAT 1260 CTTTGCAGCC CCATTAGAAA TCGTGGGCCA GAACCATTCA GATTCCTGAC CCTCAGACAC 1320 TGTGTGAGGT AATAAACATT TATTGTTTTA AGCTACTGAG TTTTGCAGCA GTTGATAAGT 1380 CAGGTAGCCC TTCTGGATCC TTTTTGCCAA TCCTCTGGGA AACGAATGGT TGGACTGCAC 1440 AGTGCCCTGC ACGCATAGAT TCGATCAATA GTGCCTAAGG GGCTTGCTCA TCTTCCAGCC 1500 ACTGTACCTC CTCATCCCCA CGGCGCCTTT CCTCCTCCAC TCCCCTGACC ACTTGCCTTT 1560 GGCAACTGAG CCAAGAACAC TTCTTATTTT TTTCTTATTT 1600
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