EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-03695

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:227993060-227993410

Target genes

Number: 23
Name	Ensembl ID

CTD	ENSG00000242757
BTF3P9	ENSG00000224834
SNAP47	ENSG00000143740
JMJD4	ENSG00000081692
WNT9A	ENSG00000143816
ARF1	ENSG00000143761
C1orf35	ENSG00000143793
MRPL55	ENSG00000162910
RP5	ENSG00000224566
GUK1	ENSG00000143774
GJC2	ENSG00000198835
C1orf148	ENSG00000203684
IBA57	ENSG00000181873
OBSCN	ENSG00000154358
C1orf145	ENSG00000162913
TRIM11	ENSG00000154370
RP11	ENSG00000231563
HIST3H3	ENSG00000168148
HIST3H2A	ENSG00000181218
HIST3H2BB	ENSG00000196890
HIST3H2BA	ENSG00000181201
RN5S18	ENSG00000212237
RHOU	ENSG00000116574

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr1:227993317-227993329	TTTATTTTTAGA	-	6.07
MEF2C	MA0497.1	chr1:227993316-227993331	TTTTATTTTTAGAAA	-	6.28

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I227805

chr1

227993001

227994393

Enhancer Sequence

TGTGCCTTTC ATTTCTTGAA GTTTCTTTTT GGTTCGTAAA AATAATCTCC ATCAAATTTA 60
TAGTTTCCAG TTGTTGCAAA AAATTCACAA GCCTAGTTTT ATCCCCTAGA GCATAATAAG 120
CACATTCATT TTACAGTTTT GGCTGATAAT TCAAGTATTT GCATTTCTTC AGGTCTGATT 180
TTCTATTGTT TCTCGGTCAT GGTATAATAT CTCACATTTC TGGTCATCTT TGTTTATGTG 240
CTGAAAGGTA TTTAAATTTT ATTTTTAGAA ATAATTTAAA GCTAGGGGTG ATATTATCAT 300
CACCTTAAGA GGATTATTAT CTGCTTCTGC TAAGCACGTG GGGGCACTAG 350