EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-03668

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:227155000-227156060

Target genes

Number: 8
Name	Ensembl ID

PARP1	ENSG00000143799
RP11	ENSG00000229965
ITPKB	ENSG00000143772
PSEN2	ENSG00000143801
ADCK3	ENSG00000163050
RP5	ENSG00000228525
CDC42BPA	ENSG00000143776
BTF3P9	ENSG00000224834

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_03749	chr1:227155198-227155777	Brain_Angular_Gyrus
SE_04558	chr1:227153382-227155971	Brain_Anterior_Caudate
SE_05448	chr1:227152659-227155937	Brain_Cingulate_Gyrus
SE_08351	chr1:227154760-227156199	Brain_Inferior_Temporal_Lobe
SE_40655	chr1:227144628-227156845	Left_Ventricle
SE_42345	chr1:227150613-227157002	Lung
SE_48073	chr1:227151494-227157401	Psoas_Muscle
SE_48649	chr1:227154059-227155897	Right_Atrium
SE_51244	chr1:227150128-227157719	Skeletal_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I226964

chr1

227152660

227156199

Enhancer Sequence

AGGAGCTACC CTGTTTTCAC ATCGGTACCT TTTCTCTGTC CCCTCCCTCT TCCTTTCACT 60
CTAGACTCTT GGTGAGCCTG TCCCTGGAAG GCTGAGTTTG ACGTGTTTCA GGACTGGTGC 120
AGTCCTCACT TCGGAGTCTT TGTGGGGTGG GGAGAAGCGG TAGAGCTAAT GCAGGCTGTT 180
AGGGAAAAGT GGTCAGAATG AAAGTCTTGA TGGTGAATTA GAATCTGGTG GAGCACCACG 240
AAGTCCTGGC GAAGGAGGCA GTAGTCAGAC CCTTTTGGGT GACGGGTTAA GGAAGACAGA 300
GACTGATGTG GAAGGGGTTA TATATAGGAA GATGTGTAGG AAGAAAAAGG TAGAGAGCTC 360
TCCTCAGAGG GTGGGGGATT ATGGGTAGCC AGAGGGAGCC TGGGTTAGTG GAGTTGAAGC 420
CCTAGTCTTG GGTGCTTTGT AGCATCAGAA GCCTCTGGAG CCTTTGCTGA CACCTGCCTG 480
ATGTACGGAG CCATCTGTGG GTGTCTGTGT GCTGGAGGAT TGCCCACAGC TATGATTCAG 540
AGATGCTCAT GTTGTTGCCC AAGCAATTGA CAGATGATGT TTCAGGCTTG GAGATGGCAG 600
GATGGGAGCA AAGAGAAGCC AGGTCAGGAA AGAACGTGCC GTTCTGGCCC TAGTGGGGAA 660
TTCTGGGCCT TCTGGCTCAC CCAGTTGAAC CTTTCAAACT GTAGGTTATG ACCCTTTAGT 720
AACTGTGAAA TTAATTTAAT GCATCAGGAT CAGCATATAA AAAACAAGTT AACTGTAATC 780
TCAGCACTTT GGGAGGCCGA GGTGGGAGAA TCACCTGAGG TCAGGAGTTT GAGACCAGCC 840
TGGCCAACAT GGTGAAACCC CAATTCCTAC TAAAAAAATA CAAAAATTAG CTAGGTGTGG 900
TGGCATGTGA CTGTAATCCC AGCTACTCGG GAGGCTGAGG CACAAGAATT GCTTGAGCCC 960
AGGAGGGAGA GGTTGCAGTG AGCTGAGATT GCGCCACTGC ACTCCAGTGG GGGCGACAGA 1020
GTGAGACTCT GTCTCAAAAA ACAAGTTAAA CAGAATGGAA 1060