Tag | Content |
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EnhancerAtlas ID | HS129-03537 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:223920480-223922450 |
Target genes | Number: 16 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Ar | MA0007.3 | chr1:223922394-223922411 | TGGCACACCATGTACCA | - | 6.01 | Gata4 | MA0482.1 | chr1:223920574-223920585 | TCTTATCTCCC | + | 6.62 | Nr5a2 | MA0505.1 | chr1:223921780-223921795 | GACCTCAAGGCCAGC | + | 6.22 | USF2 | MA0526.2 | chr1:223921349-223921365 | CCAGGTCACGTGAGTC | + | 6.03 |
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| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_00224 | chr1:223917623-223923297 | Adipose_Nuclei | SE_01908 | chr1:223920427-223922082 | Aorta | SE_02306 | chr1:223920308-223921944 | Astrocytes | SE_04026 | chr1:223920429-223923012 | Brain_Anterior_Caudate | SE_05036 | chr1:223920530-223922321 | Brain_Cingulate_Gyrus | SE_05972 | chr1:223920132-223922577 | Brain_Hippocampus_Middle | SE_07159 | chr1:223920244-223923166 | Brain_Hippocampus_Middle_150 | SE_07996 | chr1:223920284-223922259 | Brain_Inferior_Temporal_Lobe | SE_09681 | chr1:223920277-223921825 | CD14 | SE_19702 | chr1:223921073-223922029 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23408 | chr1:223920555-223922971 | Colon_Crypt_1 | SE_24051 | chr1:223920713-223921438 | Colon_Crypt_2 | SE_24051 | chr1:223921499-223922031 | Colon_Crypt_2 | SE_24051 | chr1:223922112-223922463 | Colon_Crypt_2 | SE_25230 | chr1:223920636-223922879 | Colon_Crypt_3 | SE_26209 | chr1:223920732-223921934 | Duodenum_Smooth_Muscle | SE_26925 | chr1:223921184-223922005 | Esophagus | SE_31491 | chr1:223920239-223923646 | Gastric | SE_33950 | chr1:223920559-223921591 | HCC1954 | SE_38254 | chr1:223917692-223922239 | HUVEC | SE_41495 | chr1:223920316-223922995 | Left_Ventricle | SE_42269 | chr1:223920225-223923100 | Lung | SE_45872 | chr1:223920277-223921720 | Osteoblasts | SE_49408 | chr1:223920327-223922010 | Right_Atrium | SE_50365 | chr1:223920440-223922961 | Sigmoid_Colon | SE_53249 | chr1:223920551-223922027 | Small_Intestine | SE_65644 | chr1:223920306-223922506 | Pancreatic_islets | SE_68376 | chr1:223892363-223922876 | TC32 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 223921475 | 223921876 | chr1 | 223922041 | 223922091 | chr1 | 223922066 | 223922385 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I223730 | chr1 | 223917704 | 223922480 |
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Enhancer Sequence | CTTCTACAGG TGGGGACGTT AGCATTATAA TGACATGGTA AAGTTCTGAA GGTAACAAGG 60 GGTTGCCTGT TCCAGTTTCT GCCAGTTTTG GGGGTCTTAT CTCCCTCTGG TATCTGGGCA 120 GAGGTCAAGA AGCTCTGGCA CCATCAGGGG CCAGCTTGTT TCTTTAAGCA GCTGTGCCTA 180 CAAATAAAGG GACTAAAGAA AACAATAAGA AAACCCAGTT ATTTCCTGGG GGTTGCTCTG 240 GTATCCAGCG TGTTTTACTT CACCAAGCGC AATTCTTCCC AGTGCAGGCA CTGGGTGTAA 300 CTGTGACAGC CAGCACCAAC CTGCCCACAC ACCTCCTGTC CTGCAGGACT GTCAGCAGCC 360 TCTGCACTAT AGTGTGACAG AGCCACAGGT AGCTCAGGTG TGCCTCAGCC CAGCCTCTCC 420 TGCACTCCCC CTCCCCTGGC TCCCCAACTC TGCCTCACTT CTGTTTGTGA AGGAAAGACA 480 GCAGTAGCGG AAGGGAAAGA AGGAGAAAAT GCAGAGCAAA TATTATGCTT TCCTCTTGGA 540 AAACCTCCAG GAGCTGCAAA TATTAGTAAT CCAGCTGCAT CCCACCCCCC AGGATGGGCT 600 GGGCCTGTCA CACAGCCAAC CTTCAGGATG CAGACACCCA GGCTGGGGAG CACAGCTCTG 660 GAAATTTACT GACATGGCCC TGAATGAATT TATCTTTTCA GTAGAAGGCC CTGGAGTTTA 720 AAGGAGTCAT TCATAAGGTC TGTCTGGGAG TGCCTTGTCC TCAGAGGAGG GTCTGGGTGG 780 GTTGGAGTGG AAGGAAGGGC TGGCTACCTG GTGTGCTCTC CGTGGGTCCC CAAGAAAGGC 840 AGCCCTGCTG GGGGCAGTGA AGCCCTTATC CAGGTCACGT GAGTCTTGGA AGGGGAAGGC 900 TGCTGTGCTT AACGATTCAA AAACACAAAT CAAACCTCCT TTCCCAAACA AATTAGAAGG 960 TGTGGAGGAA GCTTGAATTC AGAGAGGATT TCCCAGAGAC CCATAGGCAA AAGTGGCTTA 1020 ACTGAGCCCA GTGGGTGTCC CAGAATGGGC CAGAGAGAAT GACACTAAAA AGTCTTTGAA 1080 CAAATGAGCA AATGAATACA GGAATGCTCA TCTGCCATAG GCACAAACGT GGTAAACGTT 1140 CCCTGAGAGA ACTGACAGCC CAGGGGTGCA GGGAGAGAAA CGGTCCCAAC TGCAGACTGG 1200 GTCCCAACTG CAGACTCGGT CCCAACTGCA GACTCAGGAG GAGGGAGGCT GTTAAGGGGC 1260 CGTCTTTCCT TCTGTTATGT GAGGAGAAAA GCAGGGAAGG GACCTCAAGG CCAGCCTCTC 1320 CCAGGAGCTG CTGTTCTCAG CCCCGGGATC CAGCGCTACA GGGAAGTGCA GGGGAGGCTC 1380 CACAGTCCCG GCTGGAGACC CGGTCAGGCC TGGGTGGCCA CTCTTCTTTG TAGTGGCCAC 1440 CCTCGTGTCA CCAGCAAATG CTTTTGTATC TACACCCTTC TCAGTGCTCC CCCTCTTTTA 1500 AAAAATGTAC TTTCTTTTTT TAAAAAGAGT TGGGTCTTGC CTTGTCACCT ATGCTGGAGT 1560 GCAGTGTTGC TGTCACAGCT CACTGCAAAC TCCACCTCCT GGGCTCAACC CATCCTCCCA 1620 CCTCAGCCTC CCAGGTAGCT GGGACCACAG GCACACACCA GGACACCTCG CCCAGTGCTC 1680 ACTATTTACC TTTATTTCTT CCTTATTCGG ACACCCCTTG CTTCCAAAGA AGAGTTTCGG 1740 AAGGCTCAAG ACGGTGAGAC AGACACCTTA TGCACTGCTT CACTCTCCCC CGCAGCTCCC 1800 CTCCCTCCTC ACTGACCCCC GGCCACAACC CTCTCTCCTT GCCCCTCACC AGCCGGCACC 1860 CTTGGCAACC CTGGCACCCT TTCGAGGACA AGACTGCCAA ATGTGGCCAA GGTCTGGCAC 1920 ACCATGTACC AATCGAAACT CCACTTCCCT TGAGTTTCAG TTTCCACGCC 1970
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