| Tag | Content |
|---|
EnhancerAtlas ID | HS129-03048 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:204417260-204418310 |
Target genes | | Number: 14 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NKX2-3 | MA0672.1 | chr1:204417337-204417347 | TTCAAGTGGT | - | 6.02 | | Six3 | MA0631.1 | chr1:204417428-204417445 | GACAGGGTATCACCATG | + | 6.11 |
|
| | Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
| SE_00064 | chr1:204417530-204422553 | Adipose_Nuclei | | SE_04850 | chr1:204417565-204418666 | Brain_Cingulate_Gyrus | | SE_05834 | chr1:204414554-204422838 | Brain_Hippocampus_Middle | | SE_07775 | chr1:204417757-204421412 | Brain_Inferior_Temporal_Lobe | | SE_10255 | chr1:204417782-204418559 | CD19_Primary | | SE_10905 | chr1:204414650-204438582 | CD20 | | SE_25125 | chr1:204417816-204422942 | Colon_Crypt_3 | | SE_26688 | chr1:204416875-204421560 | Esophagus | | SE_28866 | chr1:204417158-204423024 | Fetal_Intestine_Large | | SE_31610 | chr1:204417780-204422694 | Gastric | | SE_34711 | chr1:204415846-204421729 | HeLa | | SE_40776 | chr1:204415081-204417377 | Left_Ventricle | | SE_40776 | chr1:204417564-204421617 | Left_Ventricle | | SE_42225 | chr1:204417746-204421550 | Lung | | SE_48201 | chr1:204414946-204421702 | Psoas_Muscle | | SE_48746 | chr1:204417807-204421419 | Right_Atrium | | SE_50149 | chr1:204415315-204422829 | Sigmoid_Colon | | SE_51536 | chr1:204417745-204423045 | Skeletal_Muscle | | SE_52421 | chr1:204416678-204422949 | Small_Intestine | | SE_58430 | chr1:204415099-204506026 | Ly1 | | SE_59794 | chr1:204415680-204491493 | Ly4 | | SE_62377 | chr1:204415291-204492168 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I204445 | chr1 | 204415101 | 204423341 |
|
Enhancer Sequence | AGACAGAGTC TTGCTCTGTC ACCCAGGCTG GAGTGCAGGG GTGTGATCTC GGCTCAGTGC 60
AACCTCTGCC TCCCCGGTTC AAGTGGTTCT CATGCCTCAG CTTCCTGAGT ACCTGGGATT 120
TACAGGCACC CGCCACCACA CCCAGCTAAT TTTTGTATTT CTAGTAGAGA CAGGGTATCA 180
CCATGTTGGC CACTCCTGAC CTCAAGTGAT CCCCCTGCCT CAGCCTCCCA AAGTGCTGGG 240
ATTGCAGGCA TGAGCCACCA CACCCAGCCT CATTCAACAA ATATCTATTG AATCCTAACA 300
TGTGCCAGGC ATTTTCTAGA GTCTGGGCAT AAAGCAGCAA ATAAGACAGA CAAAAATTAG 360
CCGGGCGTGG TGGTGTGCGC CTGTAGTCTC ATCTACTCGG GAGGCTGAAG TGGGAGGATG 420
ATTTGTGCCT GGGAGGCAGA GGTTGCAGTG AGCCAAGATT GTGCCATTGC ATTCCAGCCT 480
GGGTGACAGA GATCCTGTCT CAAAAAAAAA AAAAAAAAAA CCTGCCTCAG GGAGCTTTCA 540
TTCTATGTCA ACATTCATAC TCCATACCAA AGTATCTCAT AACCACAAGA AGGGGAAGCT 600
GGGAACTGAG AAGTGCACCT TGGGCGTGAC CAGCTCCTCC TCTTCTCCCT GGAGAATAGG 660
TCCATCCTGC CAAAGCACTG AGTCACTGGC AGGGGCAAAG GTGTCCCCTC AGGCCCCAAG 720
AGGACCCAGG TCAGGTTTGA TCAGACTTAG ACGTATGAAG ATTCAATACA AGGGACTCAG 780
AAGCTGAGCC CTGAATGCAG AGGGTCTCAG ACCCCATCTT CAGGCTCCAC GAAATCAATT 840
TAACCTCCAG GAGATGGGAG ATGGATACCC CAGAGCTCAC CTCACAATCC ACATCTAACC 900
ATATTCCCTC AGTTGCTTCA GTCACATCAT CCTCCCATGC TTGAAGTTCT AGCACTCTCT 960
CCTGCTGTCC CAGCCCAAAT CTCCAGGAGA AAAATGTAGA GTTGACTGGA ATGGTCTTGC 1020
TGGTGACTGG GAGGGAAGGG CTAAAGCCTC 1050
|
