Tag | Content |
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EnhancerAtlas ID | HS129-02921 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:202002920-202005060 |
Target genes | Number: 15 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CREB1 | MA0018.3 | chr1:202004082-202004094 | GGTGACGTCAGC | + | 6.14 | CREB1 | MA0018.3 | chr1:202004082-202004094 | GGTGACGTCAGC | - | 6.14 | Foxq1 | MA0040.1 | chr1:202003046-202003057 | AATAAACAATT | - | 6.02 | NFAT5 | MA0606.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 | NFATC1 | MA0624.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 | NFATC3 | MA0625.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 |
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| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_23058 | chr1:202003070-202004639 | Colon_Crypt_1 | SE_23723 | chr1:202003133-202004433 | Colon_Crypt_2 | SE_24689 | chr1:202003019-202005179 | Colon_Crypt_3 | SE_25977 | chr1:202003098-202005224 | Duodenum_Smooth_Muscle | SE_26730 | chr1:202003201-202004852 | Esophagus | SE_27624 | chr1:202002753-202007729 | Fetal_Intestine | SE_28545 | chr1:202002635-202005490 | Fetal_Intestine_Large | SE_31432 | chr1:202003030-202004833 | Gastric | SE_33417 | chr1:202002752-202008344 | H2171 | SE_33792 | chr1:202002877-202005297 | HCC1954 | SE_34304 | chr1:202003057-202005125 | HCT-116 | SE_34741 | chr1:202002989-202005297 | HeLa | SE_41626 | chr1:202003359-202004353 | LNCaP | SE_43434 | chr1:202002760-202004009 | MCF-7 | SE_43434 | chr1:202004034-202004676 | MCF-7 | SE_50066 | chr1:202002922-202004883 | Sigmoid_Colon | SE_52354 | chr1:202003018-202004869 | Small_Intestine | SE_56834 | chr1:202002917-202004651 | VACO_400 | SE_57376 | chr1:202003233-202004124 | VACO_503 | SE_57376 | chr1:202004143-202004423 | VACO_503 | SE_57945 | chr1:202003251-202004112 | VACO_9m | SE_57945 | chr1:202004146-202004634 | VACO_9m | SE_65333 | chr1:202002930-202005541 | Pancreatic_islets | SE_67013 | chr1:202002752-202008344 | H2171 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I202033 | chr1 | 202002815 | 202007566 |
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Enhancer Sequence | CACACAAAAT ATTTATCTAT TTTTGCTGTT TGTAATTGTC TTTCTCCCCC CACTAAAATG 60 AACACTCCGT GAGGGCATGG CATTTTGCCT GCTTTGCTCA CAATGTGTAT CCCACTGAAG 120 ACATCCAATA AACAATTTAT CGAATAAATG AATGCATCTA CCTGATACCT CATCAAGAAA 180 TTGATGACCA CTAATTATCA TCTTTGAACC TCTGATTGGT GACCTCTGGC AAGGCTGAGG 240 ACCTTTAGCT CTAATCAATG GGCAAAAGGT TGACCTCTTT GCTACTGATT GGCTTTTCCT 300 TTTCATTATA CCCTTGGGCT GGATGGGGAA GCTGTGTGAA TCAACGCTTC ATAAGCCTTC 360 CTCTCTGAGA ACTAGGGCTT CCAAGGAATT GGATATGAAA AGGCAGAGAG GAAGGAGGAG 420 GATATGAGAT GCCAGACGGG GGAGGGTGGG GGGGACAGGT CCCAGAAGAG GTCAGCTGGG 480 ACCCAGGCAG GATGGCATTG TGGCTGCGGG TGCCAGAGTC AGCCTGCCTG GGTTAAGGTC 540 CTCAGTCAGC CTTGACTGCT GGGTAATCCG TGGTAAGTAC CCACTGCTCC TGCCTCAGCT 600 TCCCCACCTC TCACATGTGG TTGATCCTCA CAGCCATCTC TTGGGGTTGT TCTGAAGATG 660 AAATGAGATC ATCTATGTAA GAAGCTGGCA CTTAAAAGCA CAGAGAGGGC ACCAAGGAAC 720 GTATGGTCTG TCCTTATTTG GGGAATGGGG GTGGAAGGCG CCCAGCAGGG CATGGGGCGT 780 GGTATGGCAG AGCCAGGACT AAGGGTCTGT AGCCTCCTAA ATCAGGGCTT TCTCCGCAGG 840 ATTTCCCATG TTCTCACCAT CTACAGAGTC ACTCCCCTCC ACCCTGCTGC CCCGTTCCAC 900 CAAGTGGCCC TCACACTAGG TGGAGGAGCC CTCACAGATC TCTTTCCTTC AGCCTGCCGT 960 TCTTTCTGCA GCACCAGGGC CCTGGGACCA GCTGGTGGTT TCCACCAGAG CAGCCTCGGG 1020 GTGAATTTAG TCAGGAATGT GCCCTCAGCT CAAGAGAACC CTCCCCAACC TTCCACTCCC 1080 CATACCCACC CCCGACCGCA GGTTCCCCAC CCACCCGTGG CCTGGCCAGC AGCAACCTCC 1140 ACTAGCTCGC TAGCTCAGTG ACGGTGACGT CAGCCCTGCA GTGCAGGCTG GGCTGGTTTA 1200 CCCGCAAGTT TCACCTCTCC CTGGGGAGAC TGGATTACCT CACCCTGGGA GCAGAGTGAA 1260 TGATTAACCA GCTTCATCCT GGAGGGCCTC AAAGGCCCGT CCTGGGGTGT AGGCCTACAG 1320 GGCAAGGGGC TGCATGGTCA CATACCCTAG TATGCGGGTT CACATACCCC AGCCGGGGCT 1380 GGGGTATGTG ACCGCCCCGT CCTTGGCCAC TGCCCTCTTA TCTGCATCAC TGCTCACAAG 1440 TGTCATAAAA ATTTGTCTAC AGCATATATA AATATACATA TGACGTGGAA GGCTTCCGAT 1500 GGCAAATAAC ATTTTCCATT TTGCCTAAGC TTGGGTGGCT TTTTATTCAT CTATTGTTGT 1560 TTTAAGTACA CATTTCCATC TAAACTTAGA TGTATGTTTA GGCTGGCCGC GGTGGCTCAT 1620 TGCCTGTAAT CCCAGTACCT TTTAGGGGGT TGAGGCGGGT GGATCATTTG AGGCCAGCAG 1680 TTCAAGACCA GCCTGGCCAA CATGATGAAA CCTCGTCTCT ACTAAAAAAT ACAAAAATTA 1740 GCTGGGTGTG GTGGCAGGCG TCTGTAATCT CAGCTACTCG GGAGGCTGAG GCAGGAGAAT 1800 CACTTGAACC TGGGAGGCGG AGGCTGCAGT GAGCTGAGAT TGCACCATTG CACTCCAGCC 1860 TGGGCAACAG AGTGACATTC TGTCTCAAAA ACAAAAACAA AAACAAAACA AAAAAAATAA 1920 ACTTAGATGT ATATTTAAAA ATTGCTTTTT ACCCCTGAAG GTCTCAGCAT CCTACCTGCT 1980 CTATTCATTA GTGTTTAGAT TACCCATGAC ACCAGAAGGA CTTCCCAACC CAGAAAAAGA 2040 TCCAGGAGTT GATATAAAAT ATAGAACTAC TATAATATTA GCAACTTGGA GCAGCAAGTT 2100 CTTGACTTGG GAAAGTAGGA ATTCCTCTCA TTAAGAGATG 2140
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