EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-02235

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:154999190-155000430

Target genes

Number: 35
Name	Ensembl ID

RP11	ENSG00000226855
UBE2Q1	ENSG00000160714
ADAR	ENSG00000160710
KCNN3	ENSG00000143603
PMVK	ENSG00000163344
PBXIP1	ENSG00000163346
PYGO2	ENSG00000163348
SHC1	ENSG00000160691
CKS1B	ENSG00000173207
FLAD1	ENSG00000160688
LENEP	ENSG00000163352
ZBTB7B	ENSG00000160685
DCST1	ENSG00000163357
ADAM15	ENSG00000143537
EFNA4	ENSG00000243364
EFNA3	ENSG00000143590
EFNA1	ENSG00000169242
SLC50A1	ENSG00000169241
DPM3	ENSG00000179085
HMGN2P18	ENSG00000223452
TRIM46	ENSG00000163462
KRTCAP2	ENSG00000163463
MUC1	ENSG00000185499
MTX1	ENSG00000173171
THBS3	ENSG00000169231
GBAP1	ENSG00000160766
MTX1P1	ENSG00000236675
GBA	ENSG00000177628
FAM189B	ENSG00000160767
SCAMP3	ENSG00000116521
HCN3	ENSG00000143630
CLK2	ENSG00000176444
PKLR	ENSG00000143627
FDPS	ENSG00000160752
RUSC1	ENSG00000160753

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr1:154999289-154999300	GGATGACTCAG	+	6.32
HES2	MA0616.2	chr1:154999650-154999660	GGCACGTGCC	+	6.02
HES2	MA0616.2	chr1:154999650-154999660	GGCACGTGCC	-	6.02
JUNB	MA0490.1	chr1:154999289-154999300	GGATGACTCAG	+	6.14
Nr2f6(var.2)	MA0728.1	chr1:155000257-155000272	TGAACTCCTGACCTT	-	6.04
TFAP2A	MA0003.3	chr1:154999322-154999333	TGCCTCAGGCA	+	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I155026

chr1

154999181

154999330

Enhancer Sequence

CCTGGCACAA AGACACTGTG TGAGTGACAC TCATGGCAGT TGCTATGCAG AAAACCCCAC 60
ACCTTCTGGA ATGAGGAAAG TGGAGCAGCG CAGGTCATAG GATGACTCAG ACCCTTGGCT 120
GGGGGCCTCT GATGCCTCAG GCACCCTCAT GGTGCCCTGG GGCCTGACCT CAGTTCTGGC 180
TCCTAGGACT GGCCCCATGG TCCAACTGGG TGGTACTGGT GTCTGGTCTT CCTATCCAAG 240
CCACCATATC TAAGATGACC TTAATGGTCA GTGAGTCCAC CCCCCGGCCT CCATGACCAC 300
CCAGAAGCAT TTATTTTTTT TTTTAATTTA TTTTTTGAGA CAGGGTTTCA CTTTGTCACC 360
CAGGCTGGAG TGCAGTGGTG TGATCTTGGC TCACTGCAGC CTCAACTTCC CAGGTTTGAG 420
TGATTCTCCT GCCTCAGCCT CCCAAGTTGC TGGGACTATA GGCACGTGCC ACCACGACCG 480
GCTATTTTTT TTTTTTTTTT TTTTTTGTAA AGAGATAGGG TTTCACCATG CTGGCCAGGC 540
TGGTCTCAAA CTCCTGAGCT CAAGCAATCC GCCTGCCTTA GCCTCCCAAA GTGCTAGGAT 600
TACAGGTGTG AGCCACCGAG TAAGACCCCC AGAAACATTT ATTGGCTGAG CACTGACTGT 660
GTAGCAGACA CTTCGCCTGC CTTAGCCTCC CAAAGTGCTA GGATTACAGG TGTGAGCCAC 720
CGAGTAAGAC CCCCAGAAAC ATTTATTGGC TGAGCACTGA CTGTGTAGCA GACACTTAAC 780
CAAGTGCTTT ATTGTTTGTT TTGGGGTTTT GGTTTTTGTT TTTTAGGAGT TTTTTACTTC 840
TTTTTTTTTT TTTTTTTTTT TTTTGAGACA GGGTATCACT CTGTCACCCA GGCTGGAGTG 900
CAGTGGTGTG ATCTCGGCTC ACTGCAGCCT CTGCCTCCTG GGTTCAAGTG ATTCTTGAGC 960
CTCAGCCTCC CAAGTAGCTG GGATTATAGG TGCCCACCAC TATGCCTGGC TCATTTTTTT 1020
GTATTTTTAG TAGAGACAAG GTTTCACCAT GTTGGCCATG CTGGTCTTGA ACTCCTGACC 1080
TTAGGTGATC TGTCTGCCTC AGCCTCCCAA AGTGCTAGGA TTACAGGCGT GAGCCACCGC 1140
ACCTGGCTCA CATTCTCAAT TAATGGCTTA CCAGGCACTC GACACACATA ATTTATTTTA 1200
TTTTATTTTA TTTTATTATT ATTATTTTAG ACAGAGTTTC 1240