EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-02117

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:151552210-151552600

Target genes

Number: 17
Name	Ensembl ID

SEMA6C	ENSG00000143434
LYSMD1	ENSG00000163155
SCNM1	ENSG00000163156
VPS72	ENSG00000163159
PSMD4	ENSG00000159352
ZNF687	ENSG00000143373
RP11	ENSG00000232671
PI4KB	ENSG00000143393
RFX5	ENSG00000143390
SELENBP1	ENSG00000143416
PSMB4	ENSG00000159377
POGZ	ENSG00000143442
CGN	ENSG00000143375
TUFT1	ENSG00000143367
MRPL9	ENSG00000143436
S100A10	ENSG00000197747
S100A11	ENSG00000163191

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HLF	MA0043.2	chr1:151552580-151552592	GATTACGTAACG	-	6.04
REST	MA0138.2	chr1:151552509-151552530	GGAGCTGGCAGTGGTGCTGGG	-	6.32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I151578

chr1

151550985

151552638

Enhancer Sequence

GTGTGTGCTG GGCAGCCCAG CAGGGGAACA GGACTCTTGA AGAGAAGGTG GACATAAGGG 60
AGACAGAGGT TATGGGAGGG GTCTTTGTCA TGTCTTGCTG TTGCTCTGAA GTGAATACCT 120
AGGGTGGTTG GTTGACTTTC AGTTCAGCTG AATAAACATT TTCTGAGAAC CTTCAGGAAG 180
CTGCTAACAA TGATGAGATG ACCACCCCCC TGGCCCCACC TTCAACGGAC ATGTCATCAT 240
GGTGCAAGCC ACATGCCATG GCTGCACACG GCTAATTCTG ACCCTCCAGG CTTTGCAAAG 300
GAGCTGGCAG TGGTGCTGGG CTGTGAAGGA GGAGGAGGCA TTCATACAGA TGGAGCCTTT 360
TCCAGGGCTA GATTACGTAA CGAGTTGCCT 390