EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-02087

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:150632860-150634280

Target genes

Number: 32
Name	Ensembl ID

VPS45	ENSG00000136631
PLEKHO1	ENSG00000023902
ANP32E	ENSG00000143401
C1orf54	ENSG00000118292
APH1A	ENSG00000117362
C1orf51	ENSG00000159208
MRPS21	ENSG00000187145
PRPF3	ENSG00000117360
RPRD2	ENSG00000163125
TARS2	ENSG00000143374
ECM1	ENSG00000143369
ADAMTSL4	ENSG00000143382
AL356356.1	ENSG00000225996
RP11	ENSG00000237781
C1orf138	ENSG00000203804
MCL1	ENSG00000143384
ENSA	ENSG00000143420
GOLPH3L	ENSG00000143457
HORMAD1	ENSG00000143452
CTSS	ENSG00000163131
UBE2D3P3	ENSG00000224690
CTSK	ENSG00000143387
ARNT	ENSG00000143437
SETDB1	ENSG00000143379
CERS2	ENSG00000143418
ANXA9	ENSG00000143412
FAM63A	ENSG00000143409
PRUNE	ENSG00000143363
C1orf56	ENSG00000143443
MLLT11	ENSG00000213190
CDC42SE1	ENSG00000197622
VPS72	ENSG00000163159

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HES2	MA0616.2	chr1:150633569-150633579	GGCACGTGCC	+	6.02
HES2	MA0616.2	chr1:150633569-150633579	GGCACGTGCC	-	6.02
SPI1	MA0080.4	chr1:150633261-150633275	AGAAAGAGGAAGTT	+	6.7
SPIC	MA0687.1	chr1:150633261-150633275	AGAAAGAGGAAGTT	+	6.24

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I150660

chr1

150633151

150634740

Enhancer Sequence

AGGTTAAACA TAAAACTGCT ATATGACCCA GCAATTCTAT TCCTAGGTAT ATATCCAAAA 60
GAATTAAAAA CAGGAACTTG AACAGATATT TGTGTATCAA TGTTCACAGC AGCATTATTC 120
ACAATAGCCA AAAGGTGGAA ACAAGGCAAG TGTCCATCAA CAGATGAATG GTTAAACGAA 180
AGTGTTATAT ACATACAACG GAATATCACT CAGCCATAAA CAGGAATGAA ATTTTGATAT 240
ATGCTGTGAC ATGAATGGAC CTTGAAAACA TTATGCTTGG TGAATAAGCT AGGGAAAGTA 300
ATGACAGATA TTGTATGATT CTACTTATAT GAGGTACCTA GAGTAAGCAA ATTCATAGAA 360
AAAGAAAGTA GAATAGAGGT TGCCAGGGAC TGGGGGGAGA GAGAAAGAGG AAGTTATCAT 420
TTAATAGGTA CAGAGTTTTA ATGGGTAATG ATGAGGAAGC TTTGGGTATA GTATAGATAG 480
AGGTGACGGT TACAAAATAT TGCAAATATA TTTAATTTCA CAGAATTGTA CACTTAAGAA 540
TGGCTAAAAT AATAATAAAT GTTGGCTGGG CGCGGTGGCT CACGCCTGTA ATCCCAGCAC 600
TTTGGGAGGC CAAGGCGGGC AGATCACGAA GTCAAGAGTT CGAGACAAGC CTGGCCAATA 660
TGGTGAAACC CTGTCTCTAC TAAGAATACA AAAATTAGCC AGGCGTGGTG GCACGTGCCT 720
GTAATCCCAG CTACTTGGGA GGCTGAGGCA GGAGAATTGC TTGAACCCGG GAGGCAGAGG 780
TTGCAGTGAG CTGAGATTGC ATCACTGTAC TCCAGCCTGG ACGACAGAGC AAGACTCCAT 840
CTCGAAATAA TAATAATAAT AATAAATGTT ATGTATATTT TACCACAGTA AGAATGTTAC 900
TCGTTGATTT ACATATGACC CAGTTATCTA CTCCTAGCTA CATACCCACA AGAAATGAAA 960
ACATGTTCAA ACAAAAACTT GTCCGTGCGT GTTCACAGCA GCATTATTCA CAATACCCAA 1020
AATGTGGAAA TAACTCAAAG ATTCATCAAC TGATGACTGG ATAAACAAAT GTGGTATGGC 1080
CATGCAATAA AATATTATTT GGCAAATTAA AACTGGGAAA TTCTAATAAG AATAATAGAC 1140
TGCATCAATG CCAATATTCT CATTGTCCTC TCAATAAAGA TGTTTTAAAA GTTTCTTGTG 1200
AAGAATACTA TTTAAGGGCT TTTGGGGTGG GGTGGCAGAA GATAAGGTGA AGCTTTGGAA 1260
AACTTTAGGT ATCAATTAAC CATGCTTTTT CTGTCCCTCA TTAGAATTAA ATAGTGAACC 1320
ACATCTATCT CATCCAGCAC GATGAATTTC GGTACATCTT TTACTAAATT TCAGGGTAGG 1380
ATAAAGATAA CAAAGTGTGA AATTCATATA TTATTTTAAG 1420