EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-02056

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:150232560-150233850

Target genes

Number: 37
Name	Ensembl ID

U1	ENSG00000202496
HIST2H2BF	ENSG00000203814
HIST2H3D	ENSG00000183598
HIST2H4A	ENSG00000183941
HIST2H2AA3	ENSG00000183558
HIST2H2BC	ENSG00000220323
HIST2H2AA4	ENSG00000203812
HIST2H3A	ENSG00000203852
HIST2H4B	ENSG00000182217
HIST2H2BE	ENSG00000184678
HIST2H2AC	ENSG00000184260
HIST2H2AB	ENSG00000184270
SF3B4	ENSG00000143368
RP11	ENSG00000223945
VPS45	ENSG00000136631
PLEKHO1	ENSG00000023902
ANP32E	ENSG00000143401
CA14	ENSG00000118298
C1orf54	ENSG00000118292
APH1A	ENSG00000117362
C1orf51	ENSG00000159208
MRPS21	ENSG00000187145
PRPF3	ENSG00000117360
RPRD2	ENSG00000163125
TARS2	ENSG00000143374
ECM1	ENSG00000143369
ADAMTSL4	ENSG00000143382
AL356356.1	ENSG00000225996
C1orf138	ENSG00000203804
MCL1	ENSG00000143384
ENSA	ENSG00000143420
GOLPH3L	ENSG00000143457
HORMAD1	ENSG00000143452
CTSS	ENSG00000163131
UBE2D3P3	ENSG00000224690
CTSK	ENSG00000143387
ARNT	ENSG00000143437

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_32987	chr1:150231518-150233165	H1
SE_69080	chr1:150227987-150233274	H9

Enhancer Sequence

ATGAGGGTGA GCAGATCTCA AGGCCTCCCG ACAACCCTTT CACACTGGGA CCTCCTCACC 60
TGGCAGGAAG ACACACTGTG CGGGTGGGAG GAGACTTCCT TTACCTTCTC ACCCTAGCTC 120
CTCCCTTCTG GATCTCCTCC TGCCTTGAGT TTCACATATA TGGCTCCTAG ATCCTGCTCT 180
AATCATCAAA TCCTACACCT CCTGATTTGG CAGAAAAGCT AGTTAAGTCC TCAGTAAATC 240
GTGTAGGAGT GAGGGAGCTG GGGTGGAAAG GAAGCTGGGT GGGAACTCTG AGCTTAGCTG 300
CCAGGTCTCC TTCTGGCTCC GTCTATCCTA ATCCATCCTA CCCCTAACCT GCATCTGAAA 360
TTGGGACAGA GCTGGAGGTC AGGGGTGAGG AAGAGGCTGG CAGGATAGTT TCTGACCCTG 420
GGGGAGGTGG AACTCAGTTC CTATGAACTA CTGATTAATG ACTTAACCAA ACTCAAGTTC 480
ATGATAAACG GTCAGTGTGA GAGCAAGAAG TGAATGATGA GAAGTCAGGA TATCTGAATC 540
CCAAGGCCAC TTGATAGGGG CCTCCAGGAG ACCGTATCTC TCTAGGATTT TTTTTTTTTT 600
TTTTTTTTTT TTTTTTGACA CAGAGTCTTG CTCTGTCACC CAGGCTGGAG TGCAGTGGCG 660
CAATCTGGGC TCACTGCAAA CTCCACCTCC TGGGTTTAAG TGATTCTCCT GCCTCAGCTT 720
CTCGAGTAGC TGGGATTACA GGTGCCCACC ACCACGTCTG GCTAATTTTT GCATTTTTAG 780
TAGAGATGGG GTTTCACCAT GTTGGCCAGG CTGGTCTCGA ACTCCTGACC TCAAGCGATC 840
CACCTGCCTC GGCCTCCCAA AGTGCTGGGA TTACAGGCAT GAGCCACTGT GCCTGGCCTA 900
TCTAGGATCA TTTTATTTCT CCCATTTTTC TACTCCTACT CTCTAATCCC ATCTCTCAGG 960
GTATTCAGGT TTTCTATGCA TCCCCTCTGC CCTCATTCAG CTTTCTTGTC CTCAAAATAC 1020
AGGTAAGTAA AAGAGCTACC ACTCCCCATT CATCAGGATA GTTGGGGAAT CATCACTGCC 1080
TCTGGGTAGG GAAGGGGAAC TGCAGCATGA GACTCAACAG GACTCCTACC TCACCCATCC 1140
CTATACAACT GGGGTCTTAA CCTGGGTGGA GGGAAGTCCA TTTCTACCTC CACACAGATG 1200
TATGGCTTGG TTAGGGGAAG GGTCAAAGGG AGGGGGTGCT GTTGAAGGGT AGCTAGAGCT 1260
GGAGGACAGG ACCAATGTCT TTGGTAACCC 1290