EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-01583

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:100818560-100818880

Target genes

Number: 4
Name	Ensembl ID

RP11	ENSG00000224616
RP5	ENSG00000215871
CDC14A	ENSG00000079335
BCAS2P2	ENSG00000234332

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs17420882

chr1

100818728

hg19

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_14763	chr1:100815945-100822194	CD4_Memory_Primary_7pool
SE_17398	chr1:100816322-100822128	CD4p_CD25-_CD45RAp_Naive
SE_17801	chr1:100815980-100824394	CD4p_CD25-_CD45ROp_Memory
SE_18362	chr1:100816147-100825479	CD4p_CD25-_Il17-_PMAstim_Th
SE_21270	chr1:100816101-100821825	CD8_Memory_7pool

Enhancer Sequence

TGAGGAGCAG CCGCCCCGCA TCTTCCAACG CTTTCTTGCC CCCAACTCTT CACTTCCCGC 60
GCCACTGTCC CCACCTTCTC CTGAGGCTGC CAGTGTCCTG CAGCCGCTGC GCGCGCTCTC 120
GTCCCCTCTA GGGACTCTCC TTTCTCCGAG GACCCCCTGC TTCCGGCTTC TCTTTCTTGT 180
GTCCCTTGCT CCCTCTGCAG CTCCCTCGGA TGGCCTCTCG GCCTCGTAAT GGGACAGCAC 240
CGGCTTCTGC CCGTACTCCG GCACTCAGCA GCTCATGGGG AGCCTGCTCC GGATGCTCAC 300
CGGTCACCTT TACTCCACCA 320