EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-01321

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:68203100-68205200

Target genes

Number: 7
Name	Ensembl ID

U6	ENSG00000223263
SERBP1	ENSG00000142864
RP5	ENSG00000232048
GADD45A	ENSG00000116717
RP11	ENSG00000232284
GNG12	ENSG00000172380
RPS7P4	ENSG00000229133

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_01639	chr1:68204063-68204690	Aorta
SE_01639	chr1:68204735-68205460	Aorta
SE_27197	chr1:68204070-68204772	Esophagus
SE_35889	chr1:68200970-68205638	HMEC
SE_37082	chr1:68196898-68203362	HSMMtube
SE_38054	chr1:68200685-68204775	HUVEC
SE_45739	chr1:68200628-68203436	Osteoblasts
SE_45739	chr1:68203925-68204705	Osteoblasts
SE_58705	chr1:68176128-68226756	Ly1
SE_60335	chr1:68196375-68216708	Ly4
SE_64410	chr1:68203893-68205431	NHEK

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I067731

chr1

68197359

68205433

Enhancer Sequence

TCACATGGAT GGTAAGAAGA GCTCTGGGCC CAGGGTCAAG AAACCGAGGG TCTATCTAGG 60
TTCAGCTGTT AGTTGGTTAA CTGTGTAATT TATGCAAGTT ACTCAATCCC CTTCCCTTTC 120
CCTTTCTGCA TCAGTAAAAC AAAGAGCTTG GACTAGATCA GTGTTTCCTC CTCTTTTCAA 180
TATGAAGACT TTCTTTTTTT TTTTTAAATG TATAAGCACT AGCTTTTCCC TGCTCCAAAG 240
ATAGCTGTCT TTTTGGAGCC TACTGGTTAT GAAAATACAT AATAACAAGA AATTAACAAA 300
AATGTTCTCT TTATTAATTG CAACAACATC TTCATATACT TTAACAAGAG TGGTGCCATT 360
ACATTTAAGA CATTGTTACT CAGTTTATTG TCAATATGTG GCCCCTGTAA ACAAGGGCTC 420
ACCCTTTGCA ATAAACTGTC CACTCCCCTT ACCATTCCTT GCCTGCACAC TTTGAACCTT 480
TGCATTAAAT GGCCTCTAAG ATTCTTTTCA GTGTCAAGCT TTATTATAAA AGCTTTTCTT 540
TTCCTTTTTT TTTCTGTCAC CCAGGCTGGA GTTCAGTGGC ACGATCATGT CTCACTTCAG 600
CCTCAACCTC CCAGGCTCAG ATGATCCTCC CACCTCAGCC TCCTGGGTAG CTGGGACAGG 660
TGTGCGCCAC CATGTCAGGC TATTTTTTGT TTGTTTTTTG GTAGATATGG GGTTTCGTCA 720
TGTTGCCCAG GCTGGTCTTG AACTCCTGGG CCCACCTCAG CCTCTCAAAG TGCTGTGATT 780
ACAGGTATGC ACCACTGTGC CCAGCCCTAT TAGCAAATTA TTTCTAAGAA ACTACATACC 840
AGATTTCAAT TTTTTTTGTT TTGAACAATA AAGCAAATTA TCAGTTAGTG ATTTCGTTTT 900
GTACTAAATC ACAATCACTG TGCAACAATA GCCACAGATT AATTTATTGA TTAGATATAC 960
ATAACTGAAT GCTTGTCCTA GGTATATAGA GGTGAATAAA TAGACTCAGT CACTGTCCTC 1020
ACTGAGCTTT GGTCTATATC AAGTCTTTAA CAACGATCCT GAGCCCTCCC CTCTGTTTAT 1080
CTCCAGCTTC AACCTCCCCC TGGAGCTCTG GTCTCTAATC TCTACCTGAC CTCTCAACAT 1140
TCCACTTGGA TATCTAAAAT GCATCTCAAA GTTTACACGT GTAGGCCAGG CATGGTAGCT 1200
CACACCCACA ATCCCGGCAC TCTGGGAGGC GGGAGGATCA CTTGAGACCA GGAGTTTGAG 1260
ACATGCCTGG GCAACATACA CAGAACCTGT CACTACAAAA AATTGAAAAG GTTAGCTGGG 1320
CATGATGGCA TGTGCCTGTG GTCTTAGCTA CTCCTGAAGC TGGGGGCATG AGGATTGCTT 1380
GAGCCTAAGA GTTCAAGGTT ATAGTGAAGT ATGATTGTAT CACTGCATTC CATTCTGGGC 1440
AACACAGCAA CACCTTGGCT TTTAAAACAA CAGAAATGGG ACTGGGCATG GTGGCTCATG 1500
CCTGTAATCC CAGCACTTTG GGAGGCCAAG GTGGGCAAAT CACTTGAGGT CAGGAGGTCG 1560
AGACCAGCCT GGCCAATATG GTAAAACTCC ATCATGACTA AAAATACAAA AATTAGCTGG 1620
GCGTGGTGGC AGGCGTCTGT AGTCCCAGCT ACTTGGGAGG CTGAGGCAAG AGAATCGCTT 1680
GAACCTAGGA GGCGGAGGTT GTGGTGAGCC AAGATTGCAC CATTGCACTC TAGGCTGGGC 1740
AACAGAGTGA GAATCTGTCA ATTAAAACAA ACAAAAACAA AAAAACCCCA GCAACAACAC 1800
ACTTAATATG TAGAAATCTC TGGATCCCAC CCTGTATGCC TGTCAAAATC CTTCCTCCTG 1860
TGGCATTCGC CATCTCTAAA ATGGTAATAC CATTCACCCA AATGCTCAGG CCCCAAAGAT 1920
TCTTCCTGTT CTGAAATCCT CTCCCTCAAG GTGATATCCG CAGAGAGTTG ATCACAATGA 1980
CCGGTATGAT CTTCACTCAA TTTAAGTTTA TTGAACGCCT ACTATGTGGT AGGTCCCATA 2040
TAGAGACAGA AGACAGAGGG CAGGCTGACA TCACACAACT GATGAAAAGT ATTGGGACAG 2100