EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-01078

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:46650980-46651150

Target genes

Number: 14
Name	Ensembl ID

RP11	ENSG00000236111
RP4	ENSG00000233114
TSPAN1	ENSG00000117472
PIK3R3	ENSG00000117461
LURAP1	ENSG00000171357
POMGNT1	ENSG00000085998
RAD54L	ENSG00000085999
LRRC41	ENSG00000132128
UQCRH	ENSG00000173660
NSUN4	ENSG00000117481
FAAH	ENSG00000117480
RP5	ENSG00000232022
LINC00505	ENSG00000225667
MKNK1	ENSG00000079277

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_23257	chr1:46648290-46652274	Colon_Crypt_1
SE_24097	chr1:46650882-46651579	Colon_Crypt_2
SE_31897	chr1:46645550-46652335	Gastric
SE_34180	chr1:46645443-46651019	HCC1954
SE_41846	chr1:46649005-46651848	LNCaP
SE_50730	chr1:46644589-46652277	Sigmoid_Colon

Enhancer Sequence

GTAAGCAGAT GAGGAGGCTG GGACTGGGAC ATGGGCATGA GACCAGGGCT GCTCAACCCA 60
TCTGAGGCCT CTCTGGAGGA AACAGACTTC TAACTGGGCC TCAGGTAGGG TGTCTGTGGG 120
ACAGGCTTCA GGATCCCTAT CATGTTCCCT CATCTCTCCC TGTTCCTCCC 170