EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-01039

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:45011610-45012120

Target genes

Number: 15
Name	Ensembl ID

RP11	ENSG00000233514
DMAP1	ENSG00000178028
RNF220	ENSG00000187147
TMEM53	ENSG00000126106
C1orf228	ENSG00000198520
RNU5F	ENSG00000199377
RP4	ENSG00000259794
RNU5D	ENSG00000200169
KIF2C	ENSG00000142945
RPS8	ENSG00000142937
PLK3	ENSG00000173846
TCTEX1D4	ENSG00000188396
RNU5E	ENSG00000202444
RP5	ENSG00000226499
UROD	ENSG00000126088

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_03147	chr1:45011582-45012304	Brain_Angular_Gyrus
SE_03879	chr1:45007142-45014407	Brain_Anterior_Caudate
SE_04765	chr1:45004813-45016843	Brain_Cingulate_Gyrus
SE_05770	chr1:45004656-45018313	Brain_Hippocampus_Middle
SE_06677	chr1:45004769-45016948	Brain_Hippocampus_Middle_150
SE_07718	chr1:45004644-45016900	Brain_Inferior_Temporal_Lobe

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I044545

chr1

45011583

45012304

Enhancer Sequence

AGAGACGAGG AGAAACCCTT TCTTGCATGT TCTCCTACCT CATTGCAAAC CTTTCTGAAC 60
TGAGTGAGGG GCATTCTGAA CCTGAGAGAG AAAGGGGCTA GTTCTCTGAA GATCATCACC 120
AGACCATAGA ACCAAAGTGG GTAGAAGGTT TGTAAAAGGA GGTGGAAGGT GTGACAAAGA 180
CAATAAGCAC CCGAGATGAC TCACACTGCT TGCCAGGTAA GCATGGGCTG CAGGACGTGG 240
GAGGAGAAGC TGGCGAGCTC ACTCTCGGTC CTGGTTCTTC CGGCCACCCA GCCTCTTCAT 300
GGCCAGTACC AGAAGGCCAG ATCCCTGTCC TCCTCCCCAG GCCCAGAGCC ATGGCTCAGT 360
GGCCCCCCAG GCCCAGCCTA AGAGGTCGCA TGGCTAGGAC TTCTACCTGG AGAATCACCT 420
CCACCGCAAC ATCTGAGAGC AGGAGCCACA CAGGAGCTTT CTTCTTCCAG GAAGTCCCTT 480
CCCCCAGCCC CCTGCTACTC ACTCCCCTAT 510