EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00935

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:40447370-40448080

Target genes

Number: 14
Name	Ensembl ID

RP11	ENSG00000182109
SNORA55	ENSG00000201457
PABPC4	ENSG00000090621
PPIE	ENSG00000084072
RP1	ENSG00000225333
Y	ENSG00000202222
TRIT1	ENSG00000043514
MYCL1	ENSG00000116990
MFSD2A	ENSG00000168389
RP3	ENSG00000228477
PPT1	ENSG00000131238
RLF	ENSG00000117000
ZMPSTE24	ENSG00000084073
SMAP2	ENSG00000084070

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_34178	chr1:40445631-40448581	HCC1954
SE_64654	chr1:40447355-40448355	NHEK

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I039979

chr1

40444801

40448378

Enhancer Sequence

GGCTCACTGC AACCTCGAAA TCCTGTGCTC AACAAATCCT CCTGCCTCAG CATCCTGAGT 60
AGCTGGGACT AGAGGCGTGC CACCTTGCCC AGCTAATTAT TTTATTTTTT GTAGAGACAG 120
GGTCTCCCTA TGTTGTCCAA GTTGGTCTTA ACTGCTGAGC TCAAGTGACC CTCCCTCCTT 180
GGCCTCCCAA AGTACTGAGA TTACAGATGT GAACCACCTC CTGGCCTGTC CGTTTCTTAA 240
GAACCAAGAC TTTTGTCCTG TGTCCTTCCC TCCCTTTTCA CTGCCATCAG GGCTCAGACT 300
CCAGAGCTAG TCCTCCAGCA ATCTATGGCT TTCAGCAGAT GGGTTTGGCC ATTTCTGTTA 360
ACACAAAGGG ACAACTCATA GTGTGGGAGG GGCTGTTCTA CTCCTTGCTG TTCCTTAAAG 420
GAGTAGCAGA GGCAGAGGAC GAGACCTAGG CTGTCTAATC CAACCCCACC TGATGCGTGG 480
ATGCCTGTGG CTGCCTTCTG CTTGCTCATG CCTTTGGCAG CCAGCTCATT TTGGCTCAAG 540
GCAGCCTGTT TCATTTGTGG AGAAGGGCAT AAAAAAAGGT TTCCTTCATC TTGAAAGCTA 600
TCTCCTTGTG GCTTGTCCCC ACAGATTCTA GATCCTCTCT TTGGCATCTG CACAATACAA 660
CCCTTCTCTT TGTCCCATGG AAGACCTGCA TAAATTTGAA GACAGATCTT 710