EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00881

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:38042160-38042660

Target genes

Number: 18
Name	Ensembl ID

RP11	ENSG00000233621
ZC3H12A	ENSG00000163874
MEAF6	ENSG00000163875
FTH1P1	ENSG00000232273
SNIP1	ENSG00000163877
RP3	ENSG00000237749
DNALI1	ENSG00000163879
GNL2	ENSG00000134697
RSPO1	ENSG00000169218
C1orf109	ENSG00000116922
CDCA8	ENSG00000134690
EPHA10	ENSG00000183317
MTF1	ENSG00000188786
INPP5B	ENSG00000204084
SF3A3	ENSG00000183431
U6	ENSG00000212541
FHL3	ENSG00000183386
UTP11L	ENSG00000183520

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

JUN(var.2)	MA0489.1	chr1:38042347-38042361	GTGAGTCATTTCCT	-	6.62
RORA(var.2)	MA0072.1	chr1:38042404-38042418	AGTATGTAGGTCAA	+	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I037574

chr1

38039814

38043763

Enhancer Sequence

TTCAAAGAGA GAATACACAG CACATACATG CAGTCATATA TATCCCTTTG GACAAGTAGG 60
TTGTATTACT TTGTTAATAT CAAGAATACA GTGCAAAACT GTTGATACAA CTTGATCTGA 120
AGCCTAGATA CACACCACCT ACATAATCTG AGTAAGCTGG ATACATATGC TTATTAATAA 180
ATCAGAGGTG AGTCATTTCC TCAGTCATGC AAGTGAAATT ATCCTTGTAT GTGTTAAGGT 240
TAAAAGTATG TAGGTCAAGA AATAAAAGAA GGCTCGGCAC AGTGGCTCAC GCCTGTAATC 300
CCAGCACTTT GGGAGGCCAA GGAGAGCGGA TCACCTGAGG TCAGGGGTTC GAGACCAGCC 360
TGGCCAACAT GATGAAACCC TGTCTCTACT AAAAATACAA AAATTAGCCA GGCATGGTGG 420
CGCAAGCCTG TAATCCCAGC TACTTGGGAG GCTGAGGCAG GAGAATCGCT TGAACCTGGG 480
AGGCCGAAGT TGCAGGGAAC 500