Tag | Content |
---|
EnhancerAtlas ID | HS129-00834 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:33792040-33794470 |
Target genes | Number: 15 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CEBPA | MA0102.3 | chr1:33792509-33792520 | ATTGCACAATA | + | 6.62 | LMX1B | MA0703.2 | chr1:33793970-33793981 | TTAATTAAATT | - | 6.32 | LMX1B | MA0703.2 | chr1:33793176-33793187 | ATTTTAATTAA | + | 6.62 | PPARG | MA0066.1 | chr1:33793054-33793074 | TGGGGGTCATGGTGAACTAC | - | 6.5 |
|
| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_01441 | chr1:33792611-33793911 | Adrenal_Gland | SE_03193 | chr1:33792582-33793140 | Brain_Angular_Gyrus | SE_03193 | chr1:33793269-33793869 | Brain_Angular_Gyrus | SE_03931 | chr1:33792491-33793997 | Brain_Anterior_Caudate | SE_03931 | chr1:33794043-33801388 | Brain_Anterior_Caudate | SE_04902 | chr1:33790379-33801411 | Brain_Cingulate_Gyrus | SE_05882 | chr1:33788288-33801529 | Brain_Hippocampus_Middle | SE_06849 | chr1:33792508-33796192 | Brain_Hippocampus_Middle_150 | SE_07821 | chr1:33792364-33793654 | Brain_Inferior_Temporal_Lobe | SE_07821 | chr1:33794002-33795568 | Brain_Inferior_Temporal_Lobe | SE_31828 | chr1:33792564-33793982 | Gastric | SE_36680 | chr1:33792562-33793638 | HMEC | SE_36680 | chr1:33793746-33795167 | HMEC | SE_37317 | chr1:33792781-33794769 | HSMMtube | SE_40689 | chr1:33792494-33796066 | Left_Ventricle | SE_42268 | chr1:33792440-33794203 | Lung | SE_42268 | chr1:33794219-33801089 | Lung | SE_45933 | chr1:33792382-33815405 | Osteoblasts | SE_50397 | chr1:33792548-33794088 | Sigmoid_Colon | SE_52897 | chr1:33792575-33794050 | Small_Intestine | SE_53534 | chr1:33790767-33795359 | Spleen |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 33793257 | 33794227 | chr1 | 33792643 | 33792823 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I033323 | chr1 | 33789228 | 33792216 | GH01I033327 | chr1 | 33792625 | 33795456 |
|
Enhancer Sequence | TCTAGGCATG CCTCGCAGAT CCTCTTTTCA ACAGCAGGGT TTCTAAGAAT GTGAAGGGCA 60 CTGTCCATGC TGCCCCTCAG CTTCAGAAGA ATACCAATGC AGACAACAGC TTACCCTTGA 120 AGATAATTCT GGGTGTGGTT TTTGTCTAAT GGAATGGACC CCAACAAGAT TCCCAGAAAA 180 CCCACAATTA TTTTAAGAAA TACTGAATTA CTGATTTTAA GAGTCAAAGG TAGGCCGGGC 240 GCAGTGGCTC ACGCCTATAA TCCCAGCACT TTAGGAGGCT GAGGTGGGTG GATCGCCTGA 300 GGTAAGGAGT TTGAGACCAG CCTGCCAACA TGGTGAAACC CCATCTCTAC TAAAATACAA 360 AAATTAGCTG TGTGTGGTGG CGAATGTCTG TAATCCCAGC TACTCAAGAG GCTGAGGCAG 420 AATTGCTTGA ACCCAGGAGG CGGAGGTTGC AGTGAGCCGA GATCACGCCA TTGCACAATA 480 GCCTGGGTGA TGGAGCAAGC CTCTATCTCA AAAACAAAAA ACAAAAAAGT CAAAGGTAAT 540 ATAAAATAAA AAGGAGGAAG CAGGCTGAGA AAACGACTAC ACTGAAAATA CAGGCTACTT 600 TTCACAGAAA AGGAAGGAGA ACTCAGAGGG CAGAACCAAG ACAGAAATCA CTCCCAGGCT 660 TTGAGTCCCA ATTGAGGAAA TGCCACCATA AACCCTAGCG GATTTCGGAA CTGGAATGGA 720 TCAGCGACTC TTGTACGCTC CCTGTTTCTC CCTTTTTGGA TGGGCATGTC TGTAATGGTT 780 ATCCTATGGC TGTCCCACTG TGCATTGGGT TTGTGGAAGG GAGCAGATAG CCTCTCTCTC 840 TAGTTCTCAG ATCTTCAGAC TGAGAGGACC TATACTTGAA GAACTGGACC CCAGGAGCCT 900 CATCTCACCT CAATGATGAG AGCCTGGACT TCAAACTGAT GCTGTCATGG GACCAAACTG 960 TCGGGGATTT GGTGGCGGTG AGGGTATTCT GCATGAGGAA GGAACACAAA TTTCTGGGGG 1020 TCATGGTGAA CTACATGGCT TGTCTCTGAA TGGCTCCCAA TAATCCTTGC TTCCCAGTTC 1080 ATGCCCTCTC ACAATGAGTA AGACTGACCT GTGTGACCCA TAAGATATTG TGAAAAATTT 1140 TAATTAAAAA AATATATTGT GAAAATGCCA GTACGTGGCT TCAGAGGCTA GATCATAAAG 1200 GGCACAGTGG CTTCTACCTT GCACTCCTGG ATCCCTACCT GTGGGGACAT CCCACTGCCA 1260 TGCATATCAT GAGAACACTC GAGCAGCCCT CTGGAGAGGC CCATATAGAC AAGAACCAAG 1320 GCCTCTTGCC AACAGCCAGC CCAGGGCAAA TCACGTGAGT GAGGCACCTT GGAAGAGATC 1380 CCACAGCTCT TCAGTATTCA CGTGACCTCA GCCTTGGCTG ATAAATCTTA ATTGTAACCT 1440 CATAAGACAC CTGAGGCAGA ACGGCCCAGG AAGCCACTCC TGAATTCCTT ACCCACAGCA 1500 ACTGTGTAAT AAAAATTTTG GGGATGAAGA GATAACATAC TAGGTTAAGT GACAGAGCCA 1560 GAATTTGAAC CCAGTTCTGT GTGACTCAGA AGTCTGTGCT CTTAACCACA CTGCAGTCTC 1620 TTGAGAAAGA GGCTTGTGGT TACCATGAAT ACCTGACCTG GTCGGTGTAT GAGTGAGACT 1680 GGCAGAAAAA CAGTAATGCA TCCAGGCCCC ACTGAAGGCA TCTGTGAATG ATGTAAGGCT 1740 TGCCTCTTAC AGCTGGCTCC TAGATCCCGG GCCTCACCAC CACTTGTGCT CCACCACGCA 1800 GGGCTCTGTG CCATGTCTGG CCATACCACA GACTTCCCTA TCTTCATGCC TCTGCATGTG 1860 CGCCCTCTTG CAGTCTCTCC ATCCAGCAAA GGCATACTTG TCTGTCTACT GTCATTTAGT 1920 TTACATTTTC TTAATTAAAT TTTTTTTTTT TTTTTTTGGT AGAGACAGGT CTCACCATGT 1980 TGCCCAGGCT GTTCTCAAAC TCCTGACCTC ACGCAATCCT TCCACCTCAG CCTCCCAAAG 2040 TGCTGGGACT ATAGGTGTGA GCCACCACAC CTGGCTATTT TCTTAATTTT GATGTTCCTG 2100 ACACATATCC TACACTCTAC CTGACTCCCC TCCTAATCTC TCCCAGGAGA GAGAGACAGT 2160 TAATTACATT ATCATCTCTG TATTTCACAC AGATCACTTC CCATGCCAGA AAATATACAG 2220 AATTACAGCT ATGGAATATT TATAGTTTGC ATTCTATGCT GAATATAAGC AAGCTCTTAT 2280 AGGCAGGGAG CTCATCTCAC TCATTTCTGC ACCCCAGTTC CTGAACCTGA GTCATTAACT 2340 AAACTACCTA ATCCTCCTGG TGGTGGGAGG GTCTCTCATT TTCTCTTTCC TTGCTATTCC 2400 GGGGAGACAT GGAATTTCCA AGGGCCTTAC 2430
|