EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00656

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:27248420-27249710

Target genes

Number: 35
Name	Ensembl ID

SH3BGRL3	ENSG00000142669
UBXN11	ENSG00000158062
DHDDS	ENSG00000117682
HMGN2	ENSG00000198830
RPS6KA1	ENSG00000117676
AL627313.1	ENSG00000243905
RP5	ENSG00000260063
ARID1A	ENSG00000117713
PIGV	ENSG00000060642
AL034380.1	ENSG00000241188
ZDHHC18	ENSG00000204160
SFN	ENSG00000175793
RP1	ENSG00000226698
GPN2	ENSG00000142751
NUDC	ENSG00000090273
GPATCH3	ENSG00000198746
NR0B2	ENSG00000131910
C1orf172	ENSG00000175707
RP11	ENSG00000172746
OSTCP2	ENSG00000225294
TRNP1	ENSG00000253368
FAM46B	ENSG00000158246
SLC9A1	ENSG00000090020
SNRPEP7	ENSG00000225990
WDTC1	ENSG00000142784
TMEM222	ENSG00000186501
U6	ENSG00000206888
SYTL1	ENSG00000142765
MAP3K6	ENSG00000142733
FCN3	ENSG00000142748
CD164L2	ENSG00000174950
GPR3	ENSG00000181773
WASF2	ENSG00000158195
AHDC1	ENSG00000126705
IFI6	ENSG00000126709

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata1	MA0035.3	chr1:27248929-27248940	TCCTTATCTGT	+	6.14
MAX	MA0058.3	chr1:27248821-27248831	AGCACGTGGT	-	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_35419

chr1:27247207-27250291

HepG2

Enhancer Sequence

GTAACGGCCC GCGCGGCGTC GGCCCACCCG GCGGCCTTGG CCACGCTCCT TCCGCCCTTC 60
TCTGCCTTCG AGGGCTGAGA CCCACCCCAG CGGCTCGCGG GCTTCTGGGA TGCCCCTACA 120
TTCTCACTGC GCCCAGCTTC CGGCCTGGCC ACCCGCCAGC AGGTCTCACC CGGTTCGCAT 180
CAGTCCCGGG CCCCCGGCGC CCCTCAGTAG TAGCAAATTA TCGCATCCCT GAGCTTAGGA 240
TCCCCCTTTA GTTTCACATA TGCCCCCACC CCCGTTTCCA CTTTGATGGC GGCTTCCAAG 300
GAGCATCCCT TAGTAAGAAC CGTCGCAAAT ATCGTGATTT GGATCCACCA AGGCTTGGGG 360
CGAGCCGTCG AATGTGTGTG GTAGGGGAGC GGGCTGATGT TAGCACGTGG TCTTGTTAGG 420
CCTTGAATGG GGGAATAGGA GGCCTGTGTT CACGATTAGT TTCCACCACC TACCAACTTG 480
GAACCTTTAC ATCTCTCCAA GCCTGAGTTT CCTTATCTGT GAGACAGCTG CGAATACCGG 540
TTTCCAGAGA GTAGTTAAGA ACCGTAAGTT CTCAGTAATA AGGCTTTTTC ATTCAACAAG 600
TATTTGTCGT GTGATTGATG TGTGTCCCAC ACTCGACAAT AAGGGCCAAC TGTTACAGAT 660
TCTGGAGTTG GTTTTTTTGG AACAAACACA AAGTTAACGG TAGAAAAGTC TGTCAGGATC 720
AGAACTCTCA TTCTCAGAGC CAGAGAAGTG GCAAGGATTT GCCTAGATCA TGCAACATGG 780
TTCTCACCTA GACAGGTCAG TGTGCTTCCC AGAGTCCATG GCTGATTGTG TCTTACTGGA 840
GGTAGGTTTC CATTGAACTT TCTATTCCTA TGTAACCTAG GTGTCTGGTG ACCAAGGACT 900
TCTAAGCCCT TTGTGGTGGG GAGAGTGTTT CTCATTTGCA AGTGTGAAAA GCCTTCCTGT 960
CTCCATTCCT CTAAACTGTT CGCACAAAAC TGGATTTGGG AGCGAGTTCA TTTTTGAGCA 1020
AATTGAAAAA CTGTCTAGAA GCAAGAACGG AAACCATTGA GATATGTTCT AGCATCAGAT 1080
TTAATCAGAT TTAGACCCAC TCTTGGGCAA ATAAAGGGTT TGTGTGTGCT GACCTTGAGT 1140
CACCACTAGA TTGTTTCATT CAGCAAGAAT TTTACTGATT ATGTACCTTT AGCCATATCT 1200
GGTGCCCAGC ATTGCAGGTG GCAGACAGAC TAAGCCATGG TTCATGGTTC CTATTTGTAA 1260
GGTGTTTACC CTCTGCCAGT GGGTCTCTTG 1290