EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00639

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:26698060-26699150

Target genes

Number: 20
Name	Ensembl ID

SEPN1	ENSG00000162430
PAFAH2	ENSG00000158006
PDIK1L	ENSG00000175087
ZNF593	ENSG00000142684
RP11	ENSG00000236782
CNKSR1	ENSG00000142675
CATSPER4	ENSG00000188782
CEP85	ENSG00000130695
SH3BGRL3	ENSG00000142669
CD52	ENSG00000169442
UBXN11	ENSG00000158062
AIM1L	ENSG00000176092
ZNF683	ENSG00000176083
HMGN2	ENSG00000198830
ARID1A	ENSG00000117713
SFN	ENSG00000175793
GPN2	ENSG00000142751
NUDC	ENSG00000090273
TRNP1	ENSG00000253368
FAM46B	ENSG00000158246

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr1:26698733-26698744	TGTGACTCATC	+	6.14
JUND	MA0491.1	chr1:26698733-26698744	TGTGACTCATC	+	6.14

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2
Chromosome	Start	End

chr1	26698629	26698775
chr1	26699018	26699071

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I026373

chr1

26698661

26698810

Enhancer Sequence

AGCCTGGGTG ACAGAGAAAG ACCCTGTCTC TTTAAAAAAA AAAAAAATAG ACATAGCAAA 60
ATGGGTGTAA GGCATGACTA GGCCAGGTGT GGTGGCTCAC ATCTGTAATC CCAGCACTTT 120
GGGAGGCTGA GGTGGGCCAA CTGCTTGAGC CCAGGAGTTC AAGACCAGCA TGAGCAACAT 180
GGTGAAACAC CATCTCTACA AAAAATACAA AAATTAGCCA GGCATGGTAG CGCATGCCTG 240
TTGTTCCAGC TACTCAGGAG GCTGAGGTGG GAGGATCACT TGAGCCAGGG AGGTCGAGAC 300
TGCAGTGAGC TGAGATCATG CCACTGCACT CCAGCCTGGG TGACAGAGCG AGACCCTGTC 360
TTAAAAAAAG TTAATAAATA AGGAAAAGAC ATGTCTAGAT ACAAAAAGGG AGACCTCATA 420
GGCCAGAAAG TGGCTTTTTA GCCTGAGCAA TGTCATTATT CTTGTGAGCA TGAGAAGAGG 480
CATCACCCCT GCGGCCTTAC ACAAATTCTG GTGTGCGTGA GTCTGGCCCA GGGTGCAAAA 540
GCCCCAACCA GCCATCAATC TGCACCCCAG CCACGCCACC CTGGTGTCCC AGAATATACA 600
GGGACATCTC AGGCTGTGCA CCATGGGCTG GGGCATGTTC CTGGGGTTTC TCTGCCAGCT 660
CAGCCCCTAG GGCTGTGACT CATCCTCCAC ATAACTGATC CCAACATGTT TGTGAGCATC 720
TCAAGGACAG GGTCCTCTGT CTACTCATTT TGGTTTTCCA TGTAGACATC TGTCAGGTTT 780
TTTTGGACGC CCAGCCTCTG AAACTTTTCC CCTACATGAG TCTTGAGGGA GGCAAAAGGT 840
ACCTCCCATT ATAAAAGCCG AAATGGCCAA ATACTTAATT CCAACCTCCC TCACCAGCAC 900
TTCATGCAGG CATACATGGA CTAGGTCGAT CAGATGTCCC CACCCAGAAG GGGTGACCCG 960
CACACCTTTG GCTTCCATCT GCCAGCTCTG CCCTCTCCTG GCATCACACT CTGCTCCCAA 1020
CTCTCAGAAC ACCTTGCACA ACTTCTCTGT TAGAAAAAAA TAAAAACTAC TTCCCCTCTA 1080
TCCGCACTTC 1090