Tag | Content |
---|
EnhancerAtlas ID | HS129-00173 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:8180380-8182460 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CDX2 | MA0465.1 | chr1:8180424-8180435 | AAGCAATAAAA | + | 6.32 | DUX4 | MA0468.1 | chr1:8180471-8180482 | TGATTGGATTA | - | 6.02 |
|
| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_02013 | chr1:8179206-8183891 | Aorta | SE_26216 | chr1:8175633-8183999 | Duodenum_Smooth_Muscle | SE_29143 | chr1:8180232-8183189 | Fetal_Intestine_Large | SE_33765 | chr1:8178958-8183804 | HCC1954 | SE_34231 | chr1:8172961-8184115 | HCT-116 | SE_36931 | chr1:8180494-8182174 | HSMMtube | SE_38712 | chr1:8179136-8183823 | HUVEC | SE_39254 | chr1:8179884-8182961 | IMR90 | SE_47106 | chr1:8172886-8184011 | Panc1 | SE_52130 | chr1:8180608-8181873 | Skeletal_Muscle_Myoblast | SE_54673 | chr1:8175167-8188141 | Stomach_Smooth_Muscle | SE_55699 | chr1:8180305-8183159 | u87 | SE_63913 | chr1:8180516-8181887 | HSMM | SE_67928 | chr1:8180305-8183159 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I008115 | chr1 | 8175269 | 8183809 |
|
Enhancer Sequence | TCGAACCTAG ATGGTAAAGT CTTTCTTCCC CTGACTCTAT TTCAAAGCAA TAAAAAAGTT 60 TAAAATGCCC CAAAAGACAT AGTTTACTCT ATGATTGGAT TATTAGAAGA CGTTAGCCCA 120 GGGAGGTTCT ACTCTGTTTT TCAGGGGTGG AGCTGGTACT AGAATTCACA GCCTGGTTTT 180 CATCCCAGCT GGGCCATTCC ACAAATGGAA CTTTAAACAA ATACTTCTCC TCGAAGTAGA 240 AGCTGGGTTG GGGTCTGGTC TTGAAGGATG GATCTGAAAT GGCGGAGGAG AGCCTGGCGA 300 AGCCCTCCGG CCTCCTTCCC AACGGGTCCC AGCTTTTTGC CACTTCCCTA CCTTGTATTT 360 GGCTACTAAG GAATCTAATC TGTCCAGTTT TTTATCTTGG TCATCCATAG TGTTCTATAG 420 ATCACATAGA AAGATGGTTA CAATGTTCAG CACCTCTTGC TAAACATCCT GTCCTGGAGG 480 CACATGGAGA AGGTTGACAA AGCCTCATTC CTCTGAAACA TTTCATGCAA CGGATTTGGT 540 TGAAACCCCA GATTGTGATC TGGAGTCTTT AGCAACTGTG CTCATTTCCT ACCTTGAGCA 600 TTTCATTTTT GAGCAACTAG AATAACAACT GGTCTTTTTT AGTCTTGACC AAAGGGGGAT 660 AAGGGAACCA AAAATCCTTT GCTCCTCGTT TCCTGTTAGA TTGTGAAACA AAAAGGTAAA 720 CATTTAACGG AATGTGGCAG CTCAGAACAA TTACCCCTAT TGTGGCATGA ACACTGATTT 780 CTATTCCTTT TTACACAAAC TCCTTCCGGT AGAGAAGCTG AACAAAAGAA CGTGCCAGCC 840 CAGCCCGTGG GCTCCTCAGG CCGATCAGAT CGGGAAGTGA GAAACGCCGG CAGAGATTTG 900 CTCTGGGAAA GTTTGTAGAC ATTTTCAAAG TCAAGGGTGA AGTGTCCTTG GTTTACTTAG 960 AATCGTTTTC TTTAAAGGAA ATCACTGTCA CAACTTCAGA AGCCCCGACA TGCCTGTGTA 1020 GTTATGAGAA GGGATGAAGG CTTCGCATAG CTTCATAACC TTGTTATTAA GAGTCTGGAA 1080 CTCAGTGACT GGCTGGGTGC TTGACCCTTT GTTCAGTAGC CTTGGCAAGT GCTCTCATTT 1140 TCTTCCTTTT TAGGTTTCCC CACTGCGAGC CCTTCGAGAA CAATGTCATG TTGATCGATG 1200 GCAGTGACTC ACACCAGATC TTTCCATGCC TCCTCTGCAA GGACTCAAGA GAGTCGAGAG 1260 CAAAACCGTG CCATAGTTCC ATAAGGAGGG CAAAGAGCTT TATCCACGCT GAGGAACAGG 1320 CGGATCATGC GGCTACAGCA CTGGTCTTTA CCTTTTAACT GCTTGATTCG AAACATTCCA 1380 GCCAGGAACA GTGGCTCACA CCTGTAATCC CAGCACTTTG TGGGGCCAAG GCAGGTGGAT 1440 TGCTCGAGCT CAGGAGTTCG AAACCAGCCT GGGCAACCTG GCAAAACCTC ATCTCTACAA 1500 AAAAATACAA AAATTAGCCA GGCCTGGTGT GTGTGCCTGT GGTTCCAGCC ACTCGGCAGG 1560 CTGCGGCCAG AGGATCACTT GAGCCCAGGA AGTGGAGGCT GCAGTGAGCT GAGATCGTGC 1620 CGCCACACTC CAGCCTGGGT GACAGAGCCA GACATTGTCT CTAAAAAAAA AAAAAAAAGA 1680 AAAGAAAAGA AAGAAAAAAG AGAAATAGTC CAAGACTAGG GAGAAAACCT TCTTTGGGGT 1740 CAGTGTGAAC CATTCTTTCA TTTGTTCAGC AAATGCTTAC TGAGGAGCTA CTGTGTCCCT 1800 GAAATTGCCT CCACCTCCAA GAAGACAGTG GTGAGCAAGT CAGACAATAC CTCTAATCTC 1860 ATGGTATTTA TAAGTAAATG GGCCGTTAAA ATTACCAGAT CAGAAGTGCT GTGTTCAGCA 1920 AATAGAGGCT CATGGGAAAC TCCTAAGAAG GGCTTCTGAG CTGGACTTGG GGGTCAGGAA 1980 AGGCAGAATG AGGGGGCTGA CTCATCCAGA CTGGGGCGGG GTTGCCGGGG GTGCCTCCCA 2040 CTTACTATCT GTCTCCTTCT AGACTGACTT CTCTGTCATC 2080
|