EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00138

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:6648500-6648810

Target genes

Number: 15
Name	Ensembl ID

RNF207	ENSG00000158286
RP1	ENSG00000226944
RPL22	ENSG00000116251
ICMT	ENSG00000116237
GPR153	ENSG00000158292
PLEKHG5	ENSG00000171680
RP11	ENSG00000229519
NOL9	ENSG00000162408
TAS1R1	ENSG00000173662
ZBTB48	ENSG00000204859
PHF13	ENSG00000116273
KLHL21	ENSG00000162413
THAP3	ENSG00000041988
DNAJC11	ENSG00000007923
CAMTA1	ENSG00000171735

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_01053	chr1:6646000-6649425	Adrenal_Gland
SE_01890	chr1:6645751-6654598	Aorta
SE_26672	chr1:6646006-6650409	Esophagus
SE_36216	chr1:6647613-6649018	HMEC
SE_40857	chr1:6646156-6650650	Left_Ventricle
SE_51326	chr1:6647543-6650125	Skeletal_Muscle
SE_54804	chr1:6646542-6649534	Stomach_Smooth_Muscle
SE_58743	chr1:6616886-6664806	Ly1

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I006587

chr1

6647515

6649054

Enhancer Sequence

AGGTACCTGG GCGGCCCTGG GAGAGCCATT TCCTGCTCAT CCGAGTTGGA GGGTCTCTGA 60
GGAGGAAACG CTCCTTTCTT GCCTGTGAAC CTCTTTTGTG CCCCACATGG TTAGAGTTGA 120
GAGTGGACCT GCTTTGAAGG CAGGGGTGTC CTGTGCAGTA GTGACCCTGG GTGGCACTGG 180
AGAGCCTGGC AGGGCCTGTG CAGCACTTGT AAACCACTGG TCCCCTCCCT TGCTGCCTGT 240
CCCAACCTCC TGCTGGGTTT CCTCGAGGGT CCCGGGGCTC CTGCATGATC CCCCACGGTG 300
TTCTCCCTCT 310