| Tag | Content |
|---|
EnhancerAtlas ID | HS129-00063 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:2118650-2120980 |
Target genes | | Number: 16 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:2118730-2118751 | TTTTTCTTTTTCTTTTTTTTT | + | 6.09 | | Nr2f6(var.2) | MA0728.1 | chr1:2118961-2118976 | TGAACTCCTGACCTC | - | 6.22 | | TCF3 | MA0522.2 | chr1:2118682-2118692 | AGCAGGTGTT | - | 6.02 | | Zfx | MA0146.2 | chr1:2120204-2120218 | GAGGCCGAGGCGGG | - | 6.01 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_02984 | chr1:2120458-2122921 | Bladder | | SE_24063 | chr1:2120663-2122484 | Colon_Crypt_2 | | SE_28207 | chr1:2120473-2122885 | Fetal_Intestine | | SE_29530 | chr1:2120461-2122870 | Fetal_Intestine_Large | | SE_40333 | chr1:2120433-2122106 | K562 | | SE_46689 | chr1:2120655-2122919 | Ovary | | SE_47622 | chr1:2120663-2122616 | Pancreas | | SE_54645 | chr1:2120364-2127955 | Stomach_Smooth_Muscle | | SE_55632 | chr1:2120625-2121047 | Thymus | | SE_62490 | chr1:2120386-2191742 | Tonsil | | SE_68393 | chr1:2120436-2162432 | TC32 | | SE_68394 | chr1:2120436-2162432 | TC32 | | SE_69135 | chr1:2120546-2121995 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I002188 | chr1 | 2120278 | 2122904 |
|
Enhancer Sequence | ATGGAAATGT TCACATTATT ATTTTCATTA AAAGCAGGTG TTTCCAAGAA GCAAAGGTTT 60
CTGAAGCCAT TTTCTTTTTT TTTTTCTTTT TCTTTTTTTT TTCTTTTTTT TGAGACAGAG 120
TATTACTCTG TAGCCCAGGC TGGAGTGCAG TGGCGAGATC TCGGCTCACT GCAACCTCCA 180
CCTCCCGGGT TTAAGCGATT CTCCTGCCTC AGCCTCCCCA GTAGCTGGGA TTACAGGCAC 240
CTGCCCCACG CCCGGCTAAT TTTTGTATTT TTAGTAGAGA CGGGGTTTCA CCATGTTTGC 300
CAGGCTGGTC TTGAACTCCT GACCTCAGGT GATCCACCTG CCTCAGCCTC CCAAAGTTCT 360
GGGATTACAG GCGTGAGCTA CCGCGCCCGG CCTGAAGCCA TTTTCTTAAG TAGGCATATA 420
TCAGGGCAGT TTTAGGCTCC CAGCAAAATG AGCAGAAGGT GCAGCCAAGT CCCCATGCCC 480
CTGCCCTGCC CGTCCTGCCC TGCCCAGCCT CCCCCACCAC AGGACACGCT GCTCACAGCT 540
GCTGGGCCTG CCCTTGTCGT CGCCCCACGC CCAGAGTTCC CGCCCAGCTC GCCCAGGGCA 600
CCGTCAGTCC CGTGGGTGTG GACAGGCACG TGACAGTGTG GATTCACCAC TGTGGGGCCA 660
TGCAGAGGAG CCCATGCCCC GGAGACCTCC TGTGCTCCGC CTGTGCCTTC CTAGCCCCTG 720
CACTCTCTTG ATGTTTTTGG TCCTCACGGT GTTGCCTTTT CCAGAACCCC CTAGGGTTGG 780
AATCACAGTG TGTAGCATTT TCTTTCCCTT AGTGATCTGC ATTTATGGCT CCGTGTTTTT 840
TGCGGCCTAT CTGAGGCCAT GATTGAAAGG AAAATACAGA CGTCTGGGTG TTCACACCAC 900
GTCTGCCCCC AGATCTGTTC CCTCAGCCAC CACAAACGGG GGTCAGAGCT GAGCCCGCAA 960
AGCCCGGCTC TCCAGAACCT GGGGGCTGAA CAGCAGTGGA CAGGAAGCTC CCTGAAGACG 1020
CTGCTTTCTG TGCTCCACTC ACACTGTGAG CCCAGGCAGA CGGTGGCTGA CGGATCTGGG 1080
TGAACCAGAT GCCCACTGCT GCTGTCCTTC CCCAGAAACT CCGGATTTCA GGAGAAGCTG 1140
CCTCAAAACC CCTGGCGAAT GATGAGGCCC TGGAGCCCCC GGAGAGTCTC AGCTCCCGCA 1200
GCCCTAACAA ACGACCACAG ACCTGGGGCT TCAACCAGAC TCTCTCGGCT CCAGAGGACG 1260
GCCCTCTTCT GGCCTGTGTC CCCCACGGTA GAAGGAGCAA GGGAACTCCC CAGGGTCTCC 1320
ATTATGGGGC ACTAATCCCA TCGAGAGGCG CCGCCCCGAC CTCCTGTCCT GGCAGAGTTC 1380
TTGCCTTGTG GTGAGGATTT CAACCTAGGG ATTGGGGAGT TACAGGCCCG CAGCACACGG 1440
TGGCAGGAGC CTTTCCTTTT CATAACTAGC TGCAGCTGCA AGTTCATTTT GGGGAATTAA 1500
AACACCACCG ATGGTGGAGC GCGGTGGCTC ACGCCTGTAA TCCCAGCACT TCGGGAGGCC 1560
GAGGCGGGCG GATCACGAGG TCAGGAGATC AAGACCATCC TGGCTAACAC GGTGAAACCC 1620
CGTTTCTACT GAAAACACAA AAAATTAGCC GGGCGTGGTG GCGGGCGCCT GTAGTCCCAG 1680
CTACTCGGGA GGCTGAGGCA GGAGAATGGC GTGAACCCGG GAGGCGGAGC TTGCAGTGAG 1740
CCGAAATCGC GCCACTGCAC TCCAGCCTGG GCGACAGAGC GAGACTCCGT CTCAAAAAAG 1800
AAAAAAAAAA AAAAAAACAA AAAGAACGCC ACCAGAGGCT GGGGCTGCTG GCTCACGCCT 1860
GTAATCCCAG CACTTCAGGA AGCCAAGGCG GGAGGATCGC TTGGGCCTAG GAGTTCGAGA 1920
CCAGCCTGGG CAACATGGCA AGACCCCTCC ATCTGTACAA AAAATACTAA AAGTCGCTGG 1980
GTGTGGTGAC GCGCGCCTGT AGTCCCAGCT ATTCAGGAGG CTGAGGTGGG AGGATCATCA 2040
AGCCCAGGAG TCTGAGGCTG CAATGAGCCG TGATTGCACC ACTGCACTCC AGCCTGGGCG 2100
ACAGAGCGAG ACCCTGTCTC AAAAAAAAAA AAACAAAAAA AAAACCGTGA CTGCACATGA 2160
GCTAACCACG CCTGTCCACA AAGTTAGGAA AACGAGCTAC CCTCAGCCCG TCCGCTGTCC 2220
ACAGTGGGGG CGCCAGGGGA AAGGGGTCAG CTTCCCCGCC TGGGGCTGTG TCTGGTTCTG 2280
ATTGCACTGC AGTGAATCTG CCCTAAACCA AACGTCAGAA AGAAAAGCGG 2330
|
