EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00010

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:824790-825350

Target genes

Number: 29
Name	Ensembl ID

RP4	ENSG00000236679
NOC2L	ENSG00000188976
RP5	ENSG00000240409
MTND1P23	ENSG00000225972
MTND2P28	ENSG00000225630
SAMD11	ENSG00000187634
RP11	ENSG00000234711
PLEKHN1	ENSG00000187583
C1orf170	ENSG00000187642
HES4	ENSG00000188290
ISG15	ENSG00000187608
AGRN	ENSG00000188157
KLHL17	ENSG00000187961
FAM41C	ENSG00000230368
RNF223	ENSG00000237330
C1orf159	ENSG00000131591
SDF4	ENSG00000078808
B3GALT6	ENSG00000176022
UBE2J2	ENSG00000160087
SCNN1D	ENSG00000162572
PUSL1	ENSG00000169972
ACAP3	ENSG00000131584
CPSF3L	ENSG00000127054
GLTPD1	ENSG00000224051
TAS1R3	ENSG00000169962
DVL1	ENSG00000107404
AURKAIP1	ENSG00000175756
CCNL2	ENSG00000221978
MRPL20	ENSG00000242485

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome	Start	End

chr1

825000

825006

Enhancer Sequence

TTATACAACA TCCCTATGGG AGTTGACCTC CATATTCCCT ATCTTCCCGG AATCGCAAAT 60
GGTGATTTCA GACCAAAATA TAGCCCAGAT ATTTTGCATT TGGCAATATT GCCGACTTTT 120
CCACAACTTT ATCATGGCAG GTTTGATGTG CTCACTTCTA TGATCCCTGA AAGGATATGG 180
GTTCAAGATC CTGCAAGGTT ACAATCCAAG GATAGAAGAG CCTAGACAAG AGTCCCATCA 240
CCTGGGCGAT CAGTGCAGAG ATATGTCACA AAGCCCCTGT AGGCAGAGCC TAGACAAGAG 300
TTACATCACC TGGGTGACAG GCAAACAACA ATGACAACTT ATTTTCATCC CCACTTCAGT 360
CTTTGAGGTT AGACAGACCT GGATTCAAAT CCAAGCTCCA CCCCTCGCTG TGTGAGTTTG 420
CTCATGCTGC TAACCTCTCT GAGACTTGAC TCTTCATTTA TGAAATGAGG ATAAAGCCCC 480
TTCTCTCAGG GGCTGTGCCA AGGATGAAAT GAGTCACGCA TTGGTCAGGA CAGGTGATGC 540
TGTGTAACAA GCCCCTAAAC 560