EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS128-01721

Organism

Homo sapiens

Tissue/cell

MCF-7

Coordinate

chr1:202557700-202559000

Target genes

Number: 7
Name	Ensembl ID

RP11	ENSG00000232626
SNORA70	ENSG00000253042
KDM5B	ENSG00000117139
RABIF	ENSG00000183155
KLHL12	ENSG00000117153
ADIPOR1	ENSG00000159346
CYB5R1	ENSG00000159348

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_00772	chr1:202553959-202560356	Adipose_Nuclei
SE_01829	chr1:202556215-202561709	Aorta
SE_26037	chr1:202553629-202560394	Duodenum_Smooth_Muscle
SE_30319	chr1:202554797-202559623	Fetal_Muscle
SE_36720	chr1:202557051-202564297	HMEC
SE_39088	chr1:202556267-202560601	IMR90
SE_41369	chr1:202552720-202561700	Left_Ventricle
SE_43336	chr1:202554863-202561342	Lung
SE_54806	chr1:202553244-202561134	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I202585

chr1

202554359

202563885

Enhancer Sequence

CTGTCTCCAC AGTTCAGAGC ATGGGATTTC TAGAATCTCA CATCTGGGGC AGCCTCTTCT 60
GATTTTACAT CTTATCATTG GTGGGGGCCT CGCCCACCAG CCTCCTACAA CTCCTGTCCA 120
CATAGAGGCC CCTTCCCCAG GGACAGCCAC AGTGAGTCAT GGCCACTGAG AAGGGTCTCT 180
GGTAGTATCA AGGAATTTCC TAAATGGAGT CAGGCCAAGG AGAAGCCTAG ATTGGCGTTC 240
AAAAGAACCG TAAGATAGAT AGATAGATAG ATAGATAGAT AGATAGATAG ATAGATAGAT 300
ATCAAGGTTC CAAGCTTCAA GTAACCAAGA GTATATACGG TTATTTCTTG GAAGACACCA 360
GGTTTAAGTG ACAAAGGTGT TGAGGCCATC CAGGTGAACA CTAGCACACT CTAGTACATG 420
GGAAAGTTGA GGTCTAGGGA GGTGGTGATT TCCTTGGGCT CATGGAAGTC TCCTGCCATC 480
ACCCTTAGTC ATCTGCTATA TCCATAAGTC TTCATGAGGT CATTGTTTAA TTCAGGAGAT 540
CCAAAACTAT CCTGTAGTTC CAAACTACAA ATGTAGTTAA CTTGGGGGCT ATTGAAGGTT 600
AAATCTAAAC TCAAAATGAA GGAGCCATGC CCAGAGAAGA GCTGTTCAGG CCCGCTGGCA 660
GGGTTTGTAC GTGGGTGGCC AGGTCTGACC CCAGGCAGCC AGGATCTGGG TCTGGTTTCT 720
CCATCCAGCA AGCCCTGCCT CTGGCTTTGC TCAGCCCTGT GTTTCCTGCC AAGCGGAAAT 780
CCCTGGTCAC TGACTTGGGG AGAGGTCAGG GAGGGAAGAT TCTTCTCCCC TGATGTCACC 840
CAGCTGTTTG TAACCCAAGC AGCAGCAGAA CAAGCACACT TGATGTCATG GTTGAAGAAT 900
TCAGTCCTGT CCTGGGGCAC AAAACAGAGG CAAAGAAGCA TGACCGATGC AAAGGGTTCC 960
TAGACTGCAA ATGTCATTTC TCTTTCTGAC CCCCACTGGT TGTAGTAAGG TCTGCAGATA 1020
CAGTATCACC TAGCCGTCAC GTGGTCCAGC CCTCTTGGGG GGAAAGGAGA AGGCCACAAC 1080
CTATTGGCAG AGTAAAAAGC TCATATTCTT AGCCAGGAGA CCCTCAGGTG ATAAATCCCA 1140
GTCCGTCTGC TGAAAGGCTC ATGCCCCTCA CCCTACCCAG CCTTAGGGAC TGAAGCAGCA 1200
AGACAGGATA GATGTTAAAG GATCTGGGCT CATGCTCCCT CAGGTGGGCA GCTCCCATCC 1260
CTGCTTGCAT TCACTGCCCC CATGCCTTTG GACCTGATGG 1300