Tag | Content |
---|
EnhancerAtlas ID | HS128-01260 |
Organism | Homo sapiens |
Tissue/cell | MCF-7 |
Coordinate | chr1:154417910-154420470 |
SNPs | Number: 5 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr1:154419698-154419713 | GAGGTCAGGAGTTCA | + | 6.22 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_00437 | chr1:154417920-154419740 | Adipose_Nuclei | SE_09189 | chr1:154416994-154418979 | CD14 | SE_18405 | chr1:154417507-154418244 | CD4p_CD25-_Il17-_PMAstim_Th | SE_26130 | chr1:154418047-154419303 | Duodenum_Smooth_Muscle | SE_26877 | chr1:154418094-154419106 | Esophagus | SE_42431 | chr1:154418270-154419032 | Lung | SE_44716 | chr1:154418171-154419669 | NHDF-Ad | SE_52880 | chr1:154418385-154419245 | Small_Intestine | SE_54618 | chr1:154418287-154419374 | Stomach_Smooth_Muscle | SE_65390 | chr1:154417214-154418384 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 154418605 | 154419199 | chr1 | 154419440 | 154419551 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I154447 | chr1 | 154420378 | 154421351 | GH01I154444 | chr1 | 154417077 | 154419810 |
|
Enhancer Sequence | ATAGTATGGG GAGCCTTTAA AAAACCCTAA TGACAGCTGG GCGCGGTGGC TCACACCTGT 60 AATCTCAGTA CTTTGGGAGG CTGAGGCGGG CGGATCACCA GGTCAGGAGA TCAAGACCAT 120 CCTGGCTAAC ACGGTGAAAC CCCGTCTCTA CTAAAAATAC AAAAAATTAG GCGGGTGTGG 180 TGGTGGGCGC CTGTAGTCCC AGCTACTCAG GAGGCTGAGG CAGGAGAATG GCTTGAACCC 240 AGGAGGCGGA GCTTGCAGTG AGCTGAGTTT GCGCCACAGC ACTCCAGCCC AGGCGACAGA 300 GCGAGACTCG GTCTCAAAAA AAAAAAAAGC CCTAATGACT GGGTCCCATT TCCATGGTTC 360 TGAGGCAACA AGCAAGGTGG AGCCTTCAAG GCTCCAGACG AAGCTGACTC TGGCGGGGTT 420 TGGAAAACTG CTGAACTGCA CGAGCATCCA TGGGCAGCCA TATTTTCTAT TTAGGGCTGC 480 CCCATCTTCT TCTTGTTTTC TTCTTTTTTT TTTAGAGATG AGGTCTCACT ATGTTACCCA 540 GGCTGGTTTC AAACTCCTGG CCTCATGGGA TTCTCCAGCC TCAGTCTCCC AAAGTGCTGG 600 GATTACAGGT GTGAGTCCGG CCTGCCCCCA TCTTCTTTGT CTTCTGATTT TAGCTTTCAT 660 TCTAGTGCCT CCATGCCCTC AGGTCATCCT TTAGATACCC TGGGCTATAA GTGTGTAACT 720 GTCCTCTGCT GGGCTGGGAA GAACGCAAAG GAACAATAAA CTGGGTCCCT CCCATGAATT 780 CTAGGTTCAA TTCAGGTCGC ACTTGCTGTG CGGCCTTGAA CAAGTCGCTT TCCCTCTCCG 840 GGCCTCTGTT TCCCCTCTGT ACAATTGGAA GAGTGGATGC ATTCTTATAC TTCCTCTGGT 900 GCTGCTGGTG TGTGGTTTCC CCCTTACTGG TGATGGCATA CTCCAGGAAT TCTGGAAACC 960 CTCCCTGACG CCGAAGCAGG GTCACCCTCT CCCCGCCTCC TTGCTAGTCC TTACTCCTGG 1020 CCCAGCGAGG CTCGTGATTT TTGTTTAAAC CATTCTGTGG AATTTTAGAA TTCTTGATGG 1080 AAAAATGATG AGCTGACAAG AAAATGTTTT GAAATCCAGA GCATTCCACT CACTGCCTGT 1140 TACGGTTAAG GCCCAGGCTT TCGCTTGGAT ACTTAGCCTC CTCTTGCCTT GGGGTTTCCG 1200 CAGAAACACT GTTCCCGTGC AGGGGGAGGG AGCCGTGAGG GTGCCTGGTC CACATCCCTG 1260 CTGCTGCAAT GTGTACTAAA CCCATACAGG CAAATGAATA TTTATTTGTT ATATATTTTT 1320 TATTGCAAAA AGGTGCATAG AAGGAAATTG AAATAGTGCT TATCTCTGGT GATGTGTATC 1380 TTTCCATTTT CTTCTTCCTG TGTGCAAATA TATAGTATTA TGATATATAC TGTGTTACAC 1440 AATAATCATA AAAATATATT TCTTTAGAAA GTTTGAATCA AAATACATAG AATTTTTCTT 1500 GTCTTGCATT CTTCATACAG CATTATGTCA TGTCTTCAAT GTTTTTCTAA AATATTTTTG 1560 GCCAGACGTG GTGGCACACG CCTGTAGTCC CAGATACTTG GGAAGCTGAG ATGGGAGGAT 1620 CACTGAAGCC CAGAAGTTAA AGCTACAGTG AGCCATCATC ATGCCACTGC ACTCCAGCCT 1680 GGCGACGGAG CGAGACCCTG TCTCAAAAAA TATATAATAA TTGGCCAGGC ACGGTAGCTC 1740 ATGCCTGTAA TCCTAGCACT TTGGGAGGCC AAAGCGGATA GATCACCTGA GGTCAGGAGT 1800 TCAAGACCAG CCTGGCCAAT ATGGTGAAAC CCTGTCTCTA CTAAAAATAC AAAAATTAGC 1860 TGGGTGTGGT GGTGGGCGCC TATAATCCCA ACTACTTGGG AGGCTGAGGA AGAAGAATCG 1920 CTTGAACCCA GTAGGTGGAG GTTGCAGTGA GCCGAGATTA TGCCACTTCA CTCCAGCCTG 1980 GGCAAAAGAG TGAAACTCCA TCTCAAAAAA AAAAAAAAAA ATATATATAT ATATATATAT 2040 ATACACACAC ACACACACAC ACACACACAT ATATATATAC ACACATACAT ATATATACAC 2100 ATACATATAT ATACACATAC ACATATATAT ATATACACAT ACATATATAT ATATAAAATA 2160 AATTTTAAAA GTTTCTGCAT TATGTAGTTA TGTCATAATT TCTACAGCTA GTCCCTTACG 2220 GTTGGATATT TGGTTATTTC CAGCATGCTG TTTTTTGTTT TGTTTTGTTT TGTTTTGTTT 2280 TGTTTTGTTT TGTTTTTGAG ACGGAGTTTT GCTCTTATTG CCCATGCTGG AGTGCAATGG 2340 CATGATCTCG GCTCACTGCA ACCTCCGCCT CCCGGGTTCA AACGATTCTC CTGCCTCAGC 2400 CTCCCGAGTA GCTGGGATTA CAGGCATGTG CCAGCACACC CAGCTAATTT TGTATTTTTA 2460 GTAGAGACAG GGTTTCTCCA TGTTGGTCAG GGTGGTCTCG AACTCCTAAC CTCAGGTGAT 2520 CTACCCATCC TCCCAAAGTG CTGGGATGAC AGACGTGAGC 2560
|