EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS128-00037

Organism

Homo sapiens

Tissue/cell

MCF-7

Coordinate

chr1:1724100-1724670

Target genes

Number: 18
Name	Ensembl ID

AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369
CALML6	ENSG00000169885
TMEM52	ENSG00000178821
C1orf222	ENSG00000142609
GABRD	ENSG00000187730
PRKCZ	ENSG00000067606

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)

MA0728.1

chr1:1724288-1724303

GAGGTCAGGAGTTCA

6.22

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_09353	chr1:1724468-1725906	CD14
SE_62054	chr1:1706412-1732343	Toledo

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I001793

chr1

1724469

1725906

Enhancer Sequence

CACTCTAGCC TGGAGACAGA GAGAGACTCT ATCTCAAAAA AAAAAAAAAA AAGAAAAAAA 60
TGTGTATTTT AGTTCTCAGC TGCTGAAAAT TAAACTTTGT AAATTTATTA GAAGTATAAT 120
GAGGCTAGGC ACGGAGGCTC ACGCCTGTAA TCCCAGCACT TTGGGAGGCC GAGGTGGGCA 180
GGTCACCTGA GGTCAGGAGT TCAGGACCAG CCTGGCCAAT GTGGTGAAAC CTGGTCTCTA 240
CTAAAAATAC AAAAATTAGT CAGGCGTGGT GGCGGGCACC TGTAATCCCA GCTATTCAGG 300
AGGATGAGGC AGGAGAATCA TTTAAACCCG GCAGGCAGAT GTCGCAGAGC CAAGATTGAG 360
CCATTGTACT CCAGCCTGGG TGACAAGAAC AAAACTCCAT CTCAAAAAAA AAAAAAGTAT 420
AATGAATTCA CACATTGCTA CTATGTGTTT TAAATCTTAA GGCCACTTAA ATTACAGATG 480
GCCTAATATT ATGTCAAGAA CCTTATTTCC TCCATGTTCA CAGAGGAATG TGCCAGGGGC 540
TGTGGGTTCT CAAGGCACTG CCTGCCCCGG 570