EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS126-00303

Organism

Homo sapiens

Tissue/cell

LY1

Coordinate

chr1:203256960-203257110

dbSUPER

Number of super-enhancer constituents: 62
ID	Coordinate	Tissue/cell

SE_00844	chr1:203256930-203257077	Adipose_Tissue
SE_03091	chr1:203255627-203257604	Bladder
SE_03393	chr1:203254812-203257429	Brain_Angular_Gyrus
SE_03985	chr1:203254833-203261702	Brain_Anterior_Caudate
SE_04945	chr1:203254677-203261489	Brain_Cingulate_Gyrus
SE_05898	chr1:203254744-203261699	Brain_Hippocampus_Middle
SE_06796	chr1:203254691-203261440	Brain_Hippocampus_Middle_150
SE_08928	chr1:203256615-203257062	Brain_Mid_Frontal_Lobe
SE_09289	chr1:203253137-203261383	CD14
SE_10170	chr1:203254872-203261295	CD19_Primary
SE_10871	chr1:203254420-203281750	CD20
SE_11831	chr1:203255173-203261092	CD3
SE_13716	chr1:203255728-203257853	CD34_Primary_RO01536
SE_14427	chr1:203255695-203261338	CD4_Memory_Primary_7pool
SE_15408	chr1:203255598-203257816	CD4_Memory_Primary_8pool
SE_15994	chr1:203255542-203257898	CD4_Naive_Primary_7pool
SE_16309	chr1:203255144-203261243	CD4_Naive_Primary_8pool
SE_16865	chr1:203255618-203261174	CD4p_CD225int_CD127p_Tmem
SE_17312	chr1:203254852-203262070	CD4p_CD25-_CD45RAp_Naive
SE_17785	chr1:203255097-203261829	CD4p_CD25-_CD45ROp_Memory
SE_18348	chr1:203255084-203261818	CD4p_CD25-_Il17-_PMAstim_Th
SE_19143	chr1:203255570-203261269	CD4p_CD25-_Il17p_PMAstim_Th17
SE_19992	chr1:203254864-203261519	CD56
SE_20762	chr1:203255394-203261433	CD8_Memory_7pool
SE_21467	chr1:203255647-203261152	CD8_Naive_7pool
SE_21932	chr1:203255337-203261424	CD8_Naive_8pool
SE_22316	chr1:203255232-203261677	CD8_primiary
SE_23441	chr1:203255077-203257970	Colon_Crypt_1
SE_24037	chr1:203255133-203257912	Colon_Crypt_2
SE_24893	chr1:203255051-203257952	Colon_Crypt_3
SE_25439	chr1:203254866-203258080	DND41
SE_25807	chr1:203254669-203261798	Duodenum_Smooth_Muscle
SE_26687	chr1:203255096-203261452	Esophagus
SE_27668	chr1:203254737-203262056	Fetal_Intestine
SE_28606	chr1:203254749-203261867	Fetal_Intestine_Large
SE_29589	chr1:203254843-203261369	Fetal_Muscle
SE_30896	chr1:203255056-203262032	Fetal_Thymus
SE_31419	chr1:203255131-203261567	Gastric
SE_32519	chr1:203255057-203261058	GM12878
SE_37070	chr1:203254542-203261518	HSMMtube
SE_40419	chr1:203255986-203257402	K562
SE_40823	chr1:203254932-203257925	Left_Ventricle
SE_42244	chr1:203254938-203261444	Lung
SE_43501	chr1:203254704-203262029	MM1S
SE_47668	chr1:203255131-203261337	Pancreas
SE_48192	chr1:203255016-203258041	Psoas_Muscle
SE_48633	chr1:203254956-203257904	Right_Atrium
SE_50070	chr1:203254856-203261864	Sigmoid_Colon
SE_51128	chr1:203254701-203261491	Skeletal_Muscle
SE_52362	chr1:203254784-203261941	Small_Intestine
SE_53333	chr1:203254922-203261648	Spleen
SE_55095	chr1:203255227-203261000	Thymus
SE_58291	chr1:203236214-203310877	Ly1
SE_58901	chr1:203236169-203298087	Ly3
SE_59628	chr1:203236329-203298077	Ly4
SE_60396	chr1:203236100-203315897	DHL6
SE_61013	chr1:203236073-203298344	HBL1
SE_61446	chr1:203236043-203309894	Toledo
SE_62225	chr1:203236326-203298200	Tonsil
SE_63328	chr1:203234993-203265727	NCI-H82
SE_65315	chr1:203254676-203261384	Pancreatic_islets
SE_67145	chr1:203254704-203262029	MM1S

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I203284

chr1

203253530

203261919

Enhancer Sequence

TATTACCTTG CGCCTGTGTG TGGTGACAGC GGGCATCCTT TGGCCTGCAT AGCAAAGGGC 60
CACTCCCCTC CTTTCCTCCT GTCTCCCTTC TTCCCCAACC CCTCTCTCTT GGAGGACAGA 120
GTCTGCTCCC CTAAATTCTA CTGGGTTCTT 150