| Tag | Content |
|---|
EnhancerAtlas ID | HS121-04114 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:234666090-234666770 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxq1 | MA0040.1 | chr1:234666272-234666283 | AATAAACAATT | - | 6.02 | | Foxq1 | MA0040.1 | chr1:234666265-234666276 | AATAAACAATA | - | 6.62 | | Lhx3 | MA0135.1 | chr1:234666279-234666292 | AATTAATTAATTT | - | 6.92 | | POU6F1 | MA0628.1 | chr1:234666280-234666290 | ATTAATTAAT | + | 6.02 | | POU6F1 | MA0628.1 | chr1:234666280-234666290 | ATTAATTAAT | - | 6.02 | | SP1 | MA0079.4 | chr1:234666718-234666733 | TAGACCCCGCCCCCA | + | 6.35 | | SP4 | MA0685.1 | chr1:234666718-234666735 | TAGACCCCGCCCCCACC | + | 6.29 |
|
| | Number of super-enhancer constituents: 35 | ID | Coordinate | Tissue/cell |
| SE_00256 | chr1:234663485-234676006 | Adipose_Nuclei | | SE_02030 | chr1:234665516-234666294 | Aorta | | SE_02030 | chr1:234666315-234673709 | Aorta | | SE_03087 | chr1:234666314-234666817 | Bladder | | SE_03881 | chr1:234666237-234682343 | Brain_Anterior_Caudate | | SE_04834 | chr1:234663706-234666248 | Brain_Cingulate_Gyrus | | SE_04834 | chr1:234666259-234675069 | Brain_Cingulate_Gyrus | | SE_06031 | chr1:234663344-234683729 | Brain_Hippocampus_Middle | | SE_06706 | chr1:234666212-234673639 | Brain_Hippocampus_Middle_150 | | SE_07941 | chr1:234663638-234666299 | Brain_Inferior_Temporal_Lobe | | SE_07941 | chr1:234666334-234683583 | Brain_Inferior_Temporal_Lobe | | SE_25723 | chr1:234663724-234666352 | DND41 | | SE_25924 | chr1:234663807-234675842 | Duodenum_Smooth_Muscle | | SE_26846 | chr1:234665500-234678526 | Esophagus | | SE_27803 | chr1:234666349-234675646 | Fetal_Intestine | | SE_28730 | chr1:234666297-234675651 | Fetal_Intestine_Large | | SE_29594 | chr1:234665507-234675864 | Fetal_Muscle | | SE_32368 | chr1:234666330-234673319 | Gastric | | SE_33857 | chr1:234666701-234671464 | HCC1954 | | SE_37893 | chr1:234666332-234672874 | HSMMtube | | SE_40608 | chr1:234665473-234682184 | Left_Ventricle | | SE_42375 | chr1:234663644-234677599 | Lung | | SE_47023 | chr1:234666406-234666700 | Ovary | | SE_47805 | chr1:234666387-234669564 | Pancreas | | SE_48212 | chr1:234665689-234666285 | Psoas_Muscle | | SE_48212 | chr1:234666321-234682043 | Psoas_Muscle | | SE_48672 | chr1:234664894-234666299 | Right_Atrium | | SE_48672 | chr1:234666341-234677649 | Right_Atrium | | SE_49707 | chr1:234666369-234667738 | Right_Ventricle | | SE_51126 | chr1:234663734-234677260 | Skeletal_Muscle | | SE_54537 | chr1:234664018-234666266 | Stomach_Smooth_Muscle | | SE_54537 | chr1:234666303-234682504 | Stomach_Smooth_Muscle | | SE_61054 | chr1:234622432-234680799 | HBL1 | | SE_61473 | chr1:234622384-234680928 | Toledo | | SE_68387 | chr1:234634206-234681763 | TC32 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I234527 | chr1 | 234663203 | 234683328 |
|
Enhancer Sequence | AAAAAAACCA AAAAAACAAC AAAAAAAATT AGTCAGGTGT GGTGGCATGT ACCTGTAGTC 60
CCAGCTACTT GGGAGGCTGA AGCAAGAAGA TTGTTTGAGC CCAGGAGTTG GAGGCTGCAG 120
TGAGCTATGT TTGCACCACC ACACTCCACT CTGGAGTGAC ACCCTGTCTC TAAAAAATAA 180
ACAATAAACA ATTAATTAAT TTTAAAATTA AAAAAATAAA ATATCAGATG AAATGGTCAG 240
TGTATTAAAC ACTTATCAAT GGATTCGACC CTAAAGCTTA ACTTTTAGTG ATTCTTTCTA 300
ATATTAGCTT TATTAACCAA AGTGTGGGAT TTTCCGGTTG CTCTTTTGAC GGCTAGCTGA 360
TAGGATGAGG TAGGGGCAGG GACAGGAGAG AGTTGGGTGG GGGCAATGAA AGCCCTGGCC 420
TGGCGGACAT AGTTTCAGTC TGCTCTGCAG AAGTTAAAGT ACGCCTGGGA AGACAAGGCA 480
GATAACGTAG CACGCAACTG AGCTCATGAG TGGAGGAGAG AAAAGAGAAA ATGTGTCTCT 540
GTGGGTAACC CCTGGGGGAG CCCATTTTGC AGTAAATGCA GAAACAGTAT TATTAAGTCA 600
GGATGAGCGT AAGAAGGACT GCCAGAAATA GACCCCGCCC CCACCCCCCG CACCGCCCCA 660
GGTCACTGCA CCTGCCCAAA 680
|
