| Tag | Content |
|---|
EnhancerAtlas ID | HS121-03961 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:227169850-227170370 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF4 | MA0039.3 | chr1:227170276-227170287 | GGAGGGTGTGG | - | 6.32 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_00988 | chr1:227166806-227170035 | Adrenal_Gland | | SE_05448 | chr1:227166485-227169967 | Brain_Cingulate_Gyrus | | SE_05448 | chr1:227170058-227177949 | Brain_Cingulate_Gyrus | | SE_06348 | chr1:227166402-227178880 | Brain_Hippocampus_Middle | | SE_08351 | chr1:227166753-227170248 | Brain_Inferior_Temporal_Lobe | | SE_40655 | chr1:227159396-227178782 | Left_Ventricle | | SE_48073 | chr1:227166347-227177632 | Psoas_Muscle | | SE_51244 | chr1:227170097-227173891 | Skeletal_Muscle |
|
Enhancer Sequence | GTGAGTGGGC GCGGGGGCTG CTGCCCCGGG ACTGCGTGGG CTGCTGGGGG GGTCAACTTC 60
CAGGGCCGGG AGCAGTGGCC CCACCAAAGC TCAGTGGGCA AGATGTGAGC AGGCTGGGGA 120
GAGATCTTAG AAGATAATAG GCCTGGTCTC CAGACGGGTG GCTCTGGGTC CAAAGAAACA 180
CATGGAATAA AGAGCAGAGA GGAAAAATTG CTCTCTACAG GTGGTCAGAA CACAGGTCAT 240
TTCAACATTT TACTATGTTT TATTTTCCAA ATTTCTTTTG TAATTATGAA AAACTCTGCA 300
TGTTGAGTGT AAAAAGCCCA CCTTCTCAGG TCACTGGGCG GAGGCTGGGG CTCCCGGGAA 360
GCTGAGTGGC CGAGGGCGTG TGTGCGAGGG CTCCTGTCTT TCTGGCCTCA CCCGTGCTCC 420
TGGTGGGGAG GGTGTGGTGG CCAGGGCATC CCAGGAGTGT GCCCGCCCAG GTCCTGGGCG 480
CACACTTTAA TCCCCAGGTT CGCCCTGTGT CATTCTCCTG 520
|
