Tag | Content |
---|
EnhancerAtlas ID | HS121-03930 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:226036710-226037610 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NFIA | MA0670.1 | chr1:226036968-226036978 | GGTGCCAAGT | + | 6.02 | RREB1 | MA0073.1 | chr1:226037342-226037362 | CACCCAACCAGCCCCTCACC | + | 6.18 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_04103 | chr1:226033310-226039036 | Brain_Anterior_Caudate | SE_04909 | chr1:226029288-226038857 | Brain_Cingulate_Gyrus | SE_05837 | chr1:226029277-226050904 | Brain_Hippocampus_Middle | SE_06795 | chr1:226029431-226048398 | Brain_Hippocampus_Middle_150 | SE_07978 | chr1:226033066-226038508 | Brain_Inferior_Temporal_Lobe | SE_11743 | chr1:226033094-226042126 | CD20 | SE_31182 | chr1:226033621-226038337 | Fetal_Thymus |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I225846 | chr1 | 226033427 | 226038410 |
|
Enhancer Sequence | TACCTGGTGA TAGAGGGTGG CTAGCCTTGG GGTGGGCAGG GAGGGGCCAC CACCTACCCT 60 CACCCTGCTG AGGAAGGGGC CGCACCTGGT GTGGAAACTG CCCGTGACTT CTCCCTCAGG 120 CAGAAAATAA AGGTAAGGCC TAACCCCCCA CCCCCACCCC TCAACTCCAG CAGCAAGGAT 180 GGTGTCTTCA CAGCCAGGAA CACACAGAGG GACCCACTGA ATGACTGGCA TCATCCCTGG 240 TCAGATTTCA GGCACTGGGG TGCCAAGTCA ATGGCAATTC TTCAGCCTCC TTGCTGGTCC 300 GTTCCCTCCA GTCTCCAGTG CCCTGGGCTA GAGAGGATGG ACCCTCCCAC ACCCCCAGTC 360 TGACCGGGGC AGACGTGTCT TTCCCCCAGG AGTGTCAGTT TTCTCTCCTC CACGTCCCCA 420 CCTCTTCCAT GCCAGGAGGT ACAAGGAGCT GGGCCCAACC ACCAGCCTCA AAGGGCAAAT 480 CTGGATCAGC TTCCCCATTT CCTCTGGTTC AGTCCCTGCA CAGCTGATAA AGGCACTATC 540 TTCTCTCCAG GGATGTATGG GACAATTGAC CAGGCCTTCA CAAGGGTTAC ACCTGCACTC 600 GGGCTAGCTT AGGAGCCAGG CTGTCAACAC CACACCCAAC CAGCCCCTCA CCCTGGGTAT 660 CATGTTTTGA TTGGACACCT AACCAGTCCT CACTCTGGGC ACCACATTCT GACTAGACAT 720 GTAACCAACC CTCATTCTGG GTACCACGTT CTGATGGGAC ACCTAACCAG CCCTCACTCT 780 GGGCACCACA TTCTGACTGG ATGCCATGCT GATGCTGTGA AAGCAATGAG GGATCTGACT 840 GGCTGGTGGG GATGCAGGGC TGGGAGGCCA AGGGCTGGCC CCAGGTCAGA AGGGCTGCTC 900
|