| Tag | Content |
|---|
EnhancerAtlas ID | HS121-03650 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:205631260-205631960 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF13 | MA0657.1 | chr1:205631448-205631466 | GGGCAACGCCCCTTGCTG | + | 6.12 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_05240 | chr1:205627476-205636463 | Brain_Cingulate_Gyrus | | SE_06134 | chr1:205626253-205651465 | Brain_Hippocampus_Middle | | SE_07051 | chr1:205626517-205632437 | Brain_Hippocampus_Middle_150 | | SE_08345 | chr1:205630539-205635036 | Brain_Inferior_Temporal_Lobe | | SE_23702 | chr1:205631142-205631842 | Colon_Crypt_1 | | SE_23702 | chr1:205631859-205635081 | Colon_Crypt_1 | | SE_41915 | chr1:205630941-205633271 | LNCaP |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I205662 | chr1 | 205631143 | 205631842 |
|
Enhancer Sequence | AGGGAGAGGG GCCATCAGAC AGAGCCTGGG AGGGAAGGGT CGGAGCAGTC TCAGGGAGAT 60
GAGAAGGCGG AACCACAGGT ACCTGCTGCA CGAGACCTGC TGTGGACCAG CCCTGCTCCC 120
CAGCACCCTT CCCCTTTCTA CCTCTAGCAA TGGGAGTCTA GGTTCTTCCA CTGACCCTCA 180
GAGAATGTGG GCAACGCCCC TTGCTGAAGG CAGAGGAAGG TAGTCTGAAG GTTTCCTGGG 240
AGTCTCAGCT GTGAGGACAG GCGGGTGAGA GGGAACACAA AGACAGCTGG CCATAGGCTT 300
CAAGACGCTT CTAGGACGCC TGAGCTGGAA GGCGCTGGTG AGATTATTTG GAAAGTCGTT 360
GGGGGAGCAG AGGGCACACT GCGGCTGGAA CCAGGCAGAT CTGAAATCCA GCCTTAACTC 420
CTCCACTCCC TCTAGACTTT GAATAAGCTC CGCCTTTCCT TCTGTCAAAC TGGGGCAACG 480
ACTCTGATCA GACTCCTAGA GCAGCCAGAG GCCTTCCTGA AACCGCAAGC AGAGATGTTC 540
CACACCCATG AGAAGCCGTG TATGCAGATG GGGTCCATCC CCACTTTCCT GACAGAGAAG 600
TCGGGGCCAG GATGGAGAGG CACCAGCCCA GACACAGCCC CGAGTGTCGT CTCTGGTGGG 660
CGGCTCCCAC ACCAGCCTCT GCTGGCTGCC AAGGCCTTAC 700
|
