Tag | Content |
---|
EnhancerAtlas ID | HS121-03554 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:202533680-202536900 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ALX3 | MA0634.1 | chr1:202534293-202534303 | TTTAATTAGA | - | 6.02 | E2F4 | MA0470.2 | chr1:202535091-202535105 | GAATGGCGCCACAT | - | 6.02 | Foxd3 | MA0041.1 | chr1:202536224-202536236 | AAATAAACATTC | - | 6.74 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_00772 | chr1:202531247-202541287 | Adipose_Nuclei | SE_01829 | chr1:202533947-202535834 | Aorta | SE_01829 | chr1:202536430-202539404 | Aorta | SE_26037 | chr1:202532621-202539436 | Duodenum_Smooth_Muscle | SE_30319 | chr1:202534417-202539348 | Fetal_Muscle | SE_41369 | chr1:202533977-202535976 | Left_Ventricle | SE_41369 | chr1:202536275-202537564 | Left_Ventricle | SE_43336 | chr1:202534273-202535620 | Lung | SE_43336 | chr1:202536531-202538534 | Lung | SE_54806 | chr1:202530398-202551082 | Stomach_Smooth_Muscle |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 202533961 | 202535052 | chr1 | 202535190 | 202535674 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I202564 | chr1 | 202533295 | 202533819 | GH01I202565 | chr1 | 202535057 | 202539326 |
|
Enhancer Sequence | ACGGAAGAAG AAGAAAAAAG ATGAGAACCA AGGGTTGATG TAAGGAAGCA AACTAGACTA 60 GGGATCTAAG GGACAGGAAG TAAGATAGAG TCAAGATCAG GCCTTCTCGG GGCAATGAGA 120 TAGAAGCTTC TTAGATTCTA ATTTATTTTA GGTTTCAATC AGTGTTTAAC TTAAAAAGGA 180 AAACTGATAA TTCAGTGAAC AATTCCTGAT GGTCTGAATG CTAATAATTA ATACTATGGC 240 TCATCATCTA CTTATTTATT AGTAGAAAAG CATAAACCAG CACTACAAAG CTAGTCCTAG 300 ACAGTTCCTC TTGTCCTGTT CATTATGTTT CAGTTCAGTT TATCTACACT TCACCTCTTG 360 GAGAGAGATA AGCAAGACCC TATTAAACCT AGGGCAGAGA GATAACAAAT TAAGCCTAGA 420 GAAGTAAGTG GTTTGCTTAG GCCATATAAC AAATCAAGGG CAAAGGTGGT GCCACAACAT 480 AGGGTTAAGT CCCAAAGCAA AGATTCTGTA GCATATGTTA TCTCCCCAAG CCACCACTCT 540 TTTTCAGCCT ACAAATAAGG AATATTAGTG GCAGAAAGAC TGATAAACTA TTTCCTCTCA 600 CTGCCAGGTT TGATTTAATT AGATGATGCT TTAGAGGATG CTGGAGGTAA TAACCTTGTC 660 ACCAGTGAAA CAAACTCCGC AGCTGAAAGC TAAAGCAAGC ACTGCTTTTG GTTATTGCTG 720 AGTTATCAGG AAACCTATTG AGTTATTTCC CTCCTAGAAT GCCTGGGGAC TTAGAATTTC 780 GAAAGCTGAA CTGAAGTAAA AATGATTCTT TAGCAGGAAG GCTTGAAATG AAAACCAGAG 840 GTGGCTAGTC ATTCTGGCAA TATGACTGGC TATCCAAAAG CAAAGACTAA AATGCTAGGG 900 TTGTACAGTA CCAAATACAT GGAGTTTGGA GGGCAGGGGT GTTGATTACC CTCTAAACAT 960 CCTATTCTAA CCCCTCTGGA ATTGCATGAG CAGGAGGGTG CCAACACTTG GAAGACAGCC 1020 CCACAGAGCT GCGTAGGACT CCAGCAAGAC AGCCAGGACA CTCACTTTCT GGAGAAGGGC 1080 TTACCCAGGT GTAAAATGTG AACTGCCTGT CAGTTTAGAA GAGCCACCCC CTTTTTCCTG 1140 ATTATAGTAG CCCAACATGG CTCTACTGGA AATTTCTGAG ACTTACTGCA ACACAAATAG 1200 ATAATAACTA GGCTTAAAGT GATTTTGTGG AATAAGAAAA GTAGGTTTCT AAATCTAAAA 1260 GAGAAAAATA CACACATAGC TATAGCCCTG CCATAAGGCA GCGGGGTGGA CTGAATAAAT 1320 CTCACTCCAA CATTATTGAG CCAGGCAAAA AAAAAAAAAA GTCTCATTCA CAGTAGACCC 1380 TCAAAAGAAA TCTGGGGCTA ATTTTTATTC TGAATGGCGC CACATATTGG CAGTGGTTTA 1440 TAAATACAGA TCTTATGCTG GTTCTTGTCA GTTATTACTA GGATTGTTTT ACAGAAAATT 1500 AAAGAGCAGT CATGTGAGGA ACCACAGGAA GAGCAGTTTC ACCTGCTCCC CACTCTTCTC 1560 AGCGGAAGCT TCTGACAGCA TATGTCTTGA CCTTTAGGGG TTCTCAGCAT TTCCACCAGC 1620 CCATGCCTTA GAACAGTGAG CAGTCTAACA AGCTGCTGAC ATTGACTTGC ACAGAGGGCA 1680 CTGAAAATAA AATCAGCCTT TCCAGTTGCT GGGGAAAAGC ATTTACTCTC TGGCCCACTG 1740 CTTTGCTGGG TGTGTCAAAA TATACTTAGT TTTGCCAAAT ACAAGTTATT GAAATTCATA 1800 AGAAATGGTG CTGCTACAAA CCAAGTCTCT GCCATTTACC AAAAATGGAG TTGTTTGGCA 1860 GGACAGTGGA GGGAGGGCTT CTCAGCCTCA CACATTTGTA TGGAGACAGT TACCACATGA 1920 ACATACACAA TATTTTTACA TAAAAGATCC ACCCCAACTC TAAGGGAGTC AACATTAAAA 1980 ACAGAACAAA CAAAAAACTA GTTCTTTGTG TATATAAACC TTGAAAATCA TGAAATCATC 2040 ACAACTTCTA CAGCTCCTCA GGCTTAGGAA AGAAAGACTT ACGAGGATAT TAACAAGCTG 2100 TAGGATCTAT TTTTGCGTTT TTTTCTCTTC CTTCTGCTTC ATAGTAGATG CAGCATAAAG 2160 GCAGACAGCC ATGCCCTTCC AAACAGAAGG TGAAAGCCCA GGACAGGAGC CAGAATTCTG 2220 AGTTTTATTG TTAGTTCTGG CCATTCCTTA ATTTTTTTTT TAAAAAAAGA AACTGCTGCA 2280 AGAAGACCAG CATAATTTCT ATATTTATTT AAATGTTGTC TCTGCATGAC ACTAAGCAAA 2340 ATAAAAATAA TCACCCAGCA GTTATTAAAT GTCTACTGAA TGTAAGAAAT TCTGCTGAGT 2400 TCTATGACCC TAAGGCCAAA AGGGACTTAA GGGTTTTTTA TTCCCCTTTT AAGGAAGGGC 2460 CATTATCTGA GGTTATTCTG TTTTTTTTGC CGTGAGGCTA AGTCTTTTCA GCCCCTCTGC 2520 AAAATTTAAG TCAAAGATGA TCTAAAATAA ACATTCTAAA TCTTTTATTC AAATAAAATT 2580 ACCTTATCTG GAAGCCCAAT ATATAAGACA GATGAAAGTG GACTACCTCT GTTCAAAGCA 2640 GGGCAGATGC CATGAATGGA CTCCTAAGAA CCCCTTAAAG CCCACCCACA TATGAAAACT 2700 GCTGCTCTAA AAGAAAAATG GTATCAATTC CCAAAACAGA AAGAATAGGG GAAAGGGGAT 2760 TATTTAGACA AGTGCCATTG GCCTTAGACA TTCTCGCTCA GGAGTTGCCA GCCTTTTAAA 2820 GAAAAGCCTT TTTTTTTTTT TTGTTATTTC CTCTGGGTTG TGATATTACT CATAGAATGA 2880 AGAGAGGAGA AGAATGGTGA GATGTAAAAT TGTAATTAGC ATTGAAGACC TGTGGAGAGA 2940 GAGAGAGAGA GAGAGATTGT GTGTTGTAAG TAATTTCTTT GTAATTTCAG GGAATACTAC 3000 TACTGCCTTC CCCTCCCCAG AGGGAATCCT GCAAACTTCA GAGAGGTGAT AATGTTAGGC 3060 TTAGAGATCT ATCAGAACCT GTTTGCTGGG GATCCCTGCT ATAGGGGAAG TCCAAAGTTT 3120 TACTGTTTAT TTCTAGATGT CTAGTAGTGA AGCTGAACTA GACTGGGCGT TCTACTGGCC 3180 CTTAGACAAC TTAAATAACA ACTGTTTTCC TTCCATTTGC 3220
|