EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-03200

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr1:169513750-169515670

Target genes

Number: 7
Name	Ensembl ID

RP4	ENSG00000235575
NME7	ENSG00000143156
BLZF1	ENSG00000117475
RP1	ENSG00000234437
C1orf114	ENSG00000117477
SLC19A2	ENSG00000117479
AL021068.1	ENSG00000213062

SNPs

Number: 3
ID	Chromosome	Position	Genome Version

rs1018827	chr1	169514006	hg19
rs9332591	chr1	169514790	hg19
rs3766110	chr1	169515183	hg19

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)

MA0728.1

chr1:169515482-169515497

TGAGCCTTTGACCTC

Enhancer Sequence

AAGTGTAAAA TCTGTTAAAA TTCCAAGTCT ATGCCAACAA AAGGGCATGT GTCTAATTAT 60
ACCTAAGATA AATGTCTCCA TGTTAATTTG GTTGTGTCAA AGCAGTGATT ATCCAAGATA 120
AGCTTTATCT AGTCTAACAT GTGACTAGAA GATCAAACTC AGAATTTTCA AATGAGAGAT 180
TATTCTCCTA AATTAGCCAA AGGAGAAATC TCAGGAAAAA GATAAAGCCT TCCATTTACA 240
TTGATTTAGT CATTCATCAA ATGTATAGTA AATATTTTGT GCTCCATTCT CTGCCTTTAA 300
AGATATTCTA ATAATTCCAC TTGGAGGAAA AGCATAATAT AAGAAATTCA TCTTTTTGAT 360
ATATTAGTCA TTGGGTAAGA AGTAATGTCC CTAAAAATAA AGCCCATTTA GCATATTTTA 420
TAGTTTTTAT TGCTGTCTTA TAATCTACAT AGTATTCACA GTTTCCATTT GAGTATCCAG 480
TTCATACATT TCATTATTGT TAAAAGGGAC ACTGCTGTAG GCAATATTTT TATTTACTTA 540
TGTACTAAGC ATAGTAAAAA ACCAAAGGTA TGATTTCTAC AAGGGCAGGG CTCATGTCTA 600
CCTCGATTAC CACTCTTAGC CTTAGTACCA GTATAATGAC TGGCATTAAC AAATATTTAA 660
ATACCTACTT AAATCACTTA AGTGACTTTA ATAATTTACA TGATGTATTA TTAGTTTATA 720
CCTCATTCTA GATGTTTTTC TAAATGGTCT ATAACTGCAT TGTTCAATAT GGTAGCCACT 780
GGCTACAAGT GGTTATCGAG CACTTGAAAT ATGGGTAGAC TGGACTGAGA TATGCTGTGA 840
GTATAAAATA TACATTGAAT TTCAAAGACT TAGTAATAAA GTAAGTCTCA TTAATTTTTA 900
TATTGGTTAC ATGTTGAAAT GATAATATTC AGGATATACT GAGTTAAGTA AAACATATTA 960
CTAAAATTAA TGTCACCTAT TTCTCTTTAC TTTTTAATGT TGCTATCAGA AAATTTTAAA 1020
TTACGCATGT AGCTCATACG TAGTTTCTAT TGGACAGCAC TGGTCTAGAA CTATGATAGA 1080
TTCACTGCCA AAAGGAAGTT ATGCAAAGAA AGCTGAGAGT AATTTTCTGT TTGAATTATT 1140
TGACCTGGCA CCTGTCAGCT CTGATAATCC CTAGCTGTCA GTCATCTGAA GCTATATGAA 1200
CAGAACATGC AGAAATCATC CTCACATGTG TGATTACCTA CTAGAGAAGG TGATTACCAT 1260
GACTCTAGAC TCTGAGGATC AGTAGGGGGA CCCTGGCTGT TGTGGAGAAG TTTGCTTCCA 1320
GCTGGCTCAG TGACATTTCT CTCAGACTGC CATGGCAGTG CTTTTGGCCA CTGAACTTTA 1380
GAACTGCAGC AAATGCCGGA ACCCTCATTC AGGGAATTCC TTTTGTTCTG AAAATCTTAC 1440
TGATCACTTG AAATGTCTTC ATGCATGCCT TTCCAAGACT CTTGGGTCCC TATACTCATT 1500
TTGCTCTACT TTGATGTGTC AATCCATCTT TGGATTACTT GCCTTCTTTC TGTCCTAGCC 1560
ATATATTCAC CCTGAACTCA GTCTAGGATA CTATTGACAT GGACTATAAC ACCTTCCATT 1620
AGTCCTACTC TCTCACCCTT TTCCTCACCA CGCAGAGTAT GTCTGTGTAC ACACACACAC 1680
ACACACACAC ACACACGCTT GGAATAGAAG ATCAAACGCA TTTCTAAGGA TGTGAGCCTT 1740
TGACCTCTTG CTTAAAAATG TTGCTATGAT GTCACCCACG GATTTCATCA CCAAGTCTTT 1800
GGACTGGAAG TGAGGATTGG AGGTGCCCCT TAGCGAGTAG ATTTTAATCC ATGTCTCTGA 1860
CTCTAGGCAC AGTCATATTT CAACCACAGG AATGAAAAAC TGATGAACAA AAATAGTACT 1920