EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-02951

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr1:156214700-156214930

Target genes

Number: 20
Name	Ensembl ID

SSR2	ENSG00000163479
UBQLN4	ENSG00000160803
LMNA	ENSG00000160789
SLC25A44	ENSG00000160785
RP11	ENSG00000260238
PMF1	ENSG00000160783
BGLAP	ENSG00000242252
PAQR6	ENSG00000160781
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
VHLL	ENSG00000189030
AL589685.1	ENSG00000228155
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
RHBG	ENSG00000132677
IQGAP3	ENSG00000183856
GPATCH4	ENSG00000160818
MRPL24	ENSG00000143314
HDGF	ENSG00000143321

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_05526	chr1:156210562-156224297	Brain_Cingulate_Gyrus
SE_06359	chr1:156210306-156224485	Brain_Hippocampus_Middle
SE_07557	chr1:156211370-156223218	Brain_Hippocampus_Middle_150
SE_08694	chr1:156214749-156215899	Brain_Inferior_Temporal_Lobe

Enhancer Sequence

AGCTGTCAAA GGAAAACCAA GGCTGCTGGG GAGGGACTCG GGAGCCGAAA CATGGGGTGT 60
GTCTGGGATC TGGTGAGGAC GCAGAGCGGG CGGGCACAGC TAGGCGGGGT GCTGGACCCC 120
AAGAGAGGCG GCTGGGCTGA GGCAGGGACT GAGGGGGCAG GGCTGGAAGT GGGCACCTTG 180
AGGGTCAGGA CAGGAAAGCA GGAGTCTGGG CAGGGGCCCT AGGCCTCCTT 230