EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-02949

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr1:156212620-156212820

Target genes

Number: 30
Name	Ensembl ID

RP11	ENSG00000234937
GON4L	ENSG00000116580
SYT11	ENSG00000132718
RIT1	ENSG00000143622
SNORA42	ENSG00000207475
ARHGEF2	ENSG00000116584
SSR2	ENSG00000163479
RAB25	ENSG00000132698
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SEMA4A	ENSG00000196189
SLC25A44	ENSG00000160785
PMF1	ENSG00000160783
BGLAP	ENSG00000242252
PAQR6	ENSG00000160781
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
VHLL	ENSG00000189030
AL589685.1	ENSG00000228155
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
RHBG	ENSG00000132677
C1orf61	ENSG00000125462
MEF2D	ENSG00000116604
IQGAP3	ENSG00000183856
APOA1BP	ENSG00000163382
GPATCH4	ENSG00000160818
MRPL24	ENSG00000143314
HDGF	ENSG00000143321

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_05526	chr1:156210562-156224297	Brain_Cingulate_Gyrus
SE_06359	chr1:156210306-156224485	Brain_Hippocampus_Middle
SE_07557	chr1:156211370-156223218	Brain_Hippocampus_Middle_150
SE_08694	chr1:156212349-156214567	Brain_Inferior_Temporal_Lobe

Enhancer Sequence

GGGTGAGAGA AAAGGCAGAG CTGGGCCAAG GCCCTGCCTC TCCGGGATGG TCTGTGGGGG 60
AGCTGCAGCA GGGAGTGGCC TCTCTGGGTT GTGGTGGGGG TACAGGCAGC CTGCCCTGGT 120
GGGCACCCTG GAGCCCCATG TGTAGGGAGA GGAGGGATGG GCATTTTGCA CGGGGGCTGA 180
TGCCACCACG TCGGGTGTCT 200