| Tag | Content |
|---|
EnhancerAtlas ID | HS121-01496 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:44413360-44415080 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Sox3 | MA0514.1 | chr1:44413876-44413886 | CCTTTGTTTT | + | 6.02 | | Zfx | MA0146.2 | chr1:44413428-44413442 | CAGGCCTGGGCTGG | - | 6.19 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_03320 | chr1:44412343-44415039 | Brain_Angular_Gyrus | | SE_04161 | chr1:44411174-44432213 | Brain_Anterior_Caudate | | SE_05058 | chr1:44411132-44432736 | Brain_Cingulate_Gyrus | | SE_06053 | chr1:44410047-44432756 | Brain_Hippocampus_Middle | | SE_06828 | chr1:44410993-44432278 | Brain_Hippocampus_Middle_150 | | SE_08040 | chr1:44411115-44432257 | Brain_Inferior_Temporal_Lobe | | SE_09052 | chr1:44414433-44414780 | Brain_Mid_Frontal_Lobe |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I043948 | chr1 | 44414434 | 44414780 | | GH01I043949 | chr1 | 44415047 | 44415985 |
|
Enhancer Sequence | GAGGGCTCTG GGGTGGGCAC TCCAGTGACA GAGCAGAAGT TCTGGGGACT GTCACTGATG 60
GCAGAGCTCA GGCCTGGGCT GGGTGCCCGC TGGTATGGTG CCCCCAGAGC ACCTGGCATT 120
TGCTCTCTTT CTGGGCAGGC AGTATTGCAG TGCCCTAATG GGCTATTTTT GTCTTTCCTT 180
ACAGGCAGGT CCCCTGTGGA TAGATACTCT AGGGTCTTGG GATGGTCCCT TCAGGGTGCT 240
GTGACTTAGC CTTCCGTCCA GACTGGCTAT GTTCCAGCTC CATGGGAACT GCATGAGCAG 300
TGCAGTAGGA AACTGGGAAC CCAGGAGACC TGCAGCTCAG TCTCCTGGAA TTATACTGAT 360
GCCAAACCAT CCTGGACCTG GTTTTGTTGA GCCAAGGGCT CAGAAAATAA TCTGGAACTA 420
AAACAATCTG GGTTGTTTTG ACTCTTTGGA GAAGGGTCCT TCCTTTATTG GATGGAAGCC 480
AGACCAGTCC TGAGCAGGCA GGCCTGGGGC TGTCTCCCTT TGTTTTGTGC TGAGTCCAAG 540
GGTCCTGGCC CTGCTGGGAG CCTTACAGGG CTCCTCCCTA CTCGCCTGCC CACATAGCTC 600
CCTGCCATGG CCCTCCCAGG CTCCCCGACT GCCCAGCCCA TCTTTCTGAA CTGCCTCTTT 660
GGTTCTTTTC TGTATCTGCT CCCTACAACT TGAAATGCAG GAATGCATGC ACCCTGGGAT 720
GAATGGGGAG ATGGGGCTCC CTTACTTGAA AGCAGGGAAT GATGTTCACT TGTTATCCTT 780
AACCCCCGTT TGCCATAACA AACAATGAGG ATGCATCTCT TCTGCCTGCT TTGGCGTCCC 840
TGAGGGGCCA AACAAGGGCC AATGGCCATA ACTGGCTGTC AGGGGTACAA ATAGAGCTAA 900
GCTTACTTGG ATGGAGCCTG CTTAGGGGTC AGGGTCCTGG CCATACTCTT CCGCCCCTTG 960
GAGCAGGGCA GTGTTGGCAT GGTGGCGCAC TGTTCCATGT GCTATTGGGA GATAAATCTC 1020
ACTGTTTTCT TACTTCATAA AGTCCCGTTG GAATTGAGAC CCCGGGGATT CTGCTAGTGG 1080
AGAGCACTAA GCTAGGTGTT TGCCAGGGCT GCAGCTATGG CCAAGGCTTC TCTGGATCAA 1140
TTGGTTGGAC ATGTGCCCTC TGAGGAGTGT TCTCACCCTC TCCTCCAGCA TGTCTGCCCC 1200
AGGGCTGCCT GGCAAAAGTC TTAGTCCTGC TCTGATTTCA CACTGGCTTT GGTGCCAGCA 1260
TCTGGACTGA CCTAGGGATG ATCCTGGGGG AGCTGAAAGG AGCTGTTGGA GTTGATGGGA 1320
GCAGCTGTGC CTGGGAGGGT CAAGTCCCCT CAAGCTGTTC CATGCCCTTC TCAGACTTAG 1380
CTTCATCCCT GTGAAGCTGT TCCTTCCACC TGGGCCTTGC CCTCAAGTGC CTCCCCTTTG 1440
GGGAGATCAG CCTCCTCTTT TTTGCTTTCC TGTGGAGATT CCCTCTCTGA ACCCATAATG 1500
TTTTGCTGTA AGGAGAAGAG GATATGGTAG AGCATGGGCA AGGTTCAGGC TCTCAAGATA 1560
TCAGCAGGAC CCCAGGCCCA GGAAACACTG CAGAGCGCTG AGCTCTCCCT GCTCAGCCCC 1620
CCAGTCAGGG AGAGGGAGCA GCCTTGCAGG ACCAAGTCAC GCCTCTGTTC TGGGCTCTGG 1680
CAGGATCCAG AGTGGCCAGC ACCTGCTCAG TCCTGTGCTG 1720
|
