| Tag | Content |
|---|
EnhancerAtlas ID | HS121-00998 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:27674500-27675570 |
Target genes | | Number: 13 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF4G | MA0484.1 | chr1:27675508-27675523 | TGACCTTTGACCTCT | - | 7.22 | | NR2C2 | MA0504.1 | chr1:27675490-27675505 | TGACCTCTGACCCCA | - | 7.91 | | NR2C2 | MA0504.1 | chr1:27675508-27675523 | TGACCTTTGACCTCT | - | 8.25 | | Nr2f6 | MA0677.1 | chr1:27675490-27675504 | TGACCTCTGACCCC | - | 7.03 | | Nr2f6 | MA0677.1 | chr1:27675508-27675522 | TGACCTTTGACCTC | - | 8.42 | | RARA(var.2) | MA0730.1 | chr1:27675497-27675514 | TGACCCCAATATGACCT | - | 7.07 | | Rxra | MA0512.2 | chr1:27675490-27675504 | TGACCTCTGACCCC | - | 6.98 | | Rxra | MA0512.2 | chr1:27675508-27675522 | TGACCTTTGACCTC | - | 8.12 |
|
| | Number of super-enhancer constituents: 2 | ID | Coordinate | Tissue/cell |
| SE_34417 | chr1:27673618-27674910 | HCT-116 | | SE_34417 | chr1:27675006-27676831 | HCT-116 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027347 | chr1 | 27673619 | 27674910 |
|
Enhancer Sequence | GAGGTAAGTG AATGAGCCAA CATGTGAGTA CAGTGTCCCT GGAGGGGAGG TGGAATGTGC 60
AGGGGGCAGG GGGGAAAGAG CCCCAGCCTG GGAATGGGGA GACCCTGGAA ATGTTCCTTC 120
CTGTGTCTGC ACCTCATCAC CTCCTGGGTG GAACAGTGGT GAACGGTGGG GAACGGTGGT 180
GAATGGTGGT AAACAGTGGT GAACGGTGGT GAACAGTGAG TGGTATATGG ACCCAGCCTC 240
TAAGGGAACT TCTGAATCTG GCTATTAAGG GGTGAAGTGG GGCCAGGCAC GGTGGCTCAT 300
GCCTGTAATC CCAGCATTTT GGGAGGCTGA TGTGGGAGGA TCGCTTGAGC CGAGGAGTTC 360
AAGACCAGCC TGGGCAACAT AGCAAAATGC CCCCCATGTC TATAAAAAAT AAATAAAAAA 420
AAAAGGCCGG TCGTGGCAGC TCACGCCTAT AATCCCAGCA CTTTGGGAAG CCGAGATCAC 480
CTGAGGTCAG GAGCTCAAGA CCAGCCTGAC TAACATGGAG AAACCCCATC TCTACTAAAA 540
ATACAAAATT AGCTGGGCAT GATGGTGCAT AACCTGGAAT CTCAGCTACT GGGAGGCTGA 600
GGCAGGAGAA TCGCTTGAAC CCAGGAGGCG GAGGTTGCAG TGAGCCAAGA TCACACCATT 660
GCACTCTAGC CTGGGCAACA AGAGTGAAAC TCTGTCTCAA TTAAAAATAA TAAGAATAAA 720
TTTAAAAAAA GAAAAAAGGT TGTCTACCAA TGGGTCAATA TAAAAAATAA AAATAAAAAA 780
AGGAGTGAGA AAGGAATGGG ACTGGCCTGG CCTGGCAGAG GTGGAGGACT CAGGTACGAA 840
TGACCCCACC AATGGGAGTA GGGAGTCAGG CGGCACAAGC CCTGCGGGGT GGGCTGTGAA 900
GCACTGGTCT CACCGCTCCT GCAGCTGGCT GCCAGCCCTG CCCGGAGGGC TGCCCTAAAC 960
CTGAAACTGG GGTAGCTGGC TGGAGCCCTA TGACCTCTGA CCCCAATATG ACCTTTGACC 1020
TCTTCCTCAC CAGCCCCCGT ACTGTGACCT CTACCCCTTT CTTCCTTCAG 1070
|
