EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-00562

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr1:9783350-9784020

Target genes

Number: 10
Name	Ensembl ID

PIK3CD	ENSG00000171608
RP11	ENSG00000231789
CLSTN1	ENSG00000171603
CTNNBIP1	ENSG00000178585
LZIC	ENSG00000162441
NMNAT1	ENSG00000173614
7SK	ENSG00000202415
RBP7	ENSG00000162444
UBE4B	ENSG00000130939
PGAM1P11	ENSG00000233623

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_09834	chr1:9783942-9785130	CD14
SE_11127	chr1:9773865-9785620	CD20
SE_15145	chr1:9783201-9784745	CD4_Memory_Primary_7pool
SE_17476	chr1:9783799-9785482	CD4p_CD25-_CD45RAp_Naive

Enhancer Sequence

GTGGGTTTCA GGCCCAGGGA TAGGTTCCCT CTCCTTTCCA AGAGGTGTGG AGTGGGAGGG 60
CCTCGCCTGT CAGAACAAAG GAGCGGGGAG GGGCCTCAGA CCATCTTTGT GGCTACTTGG 120
CTCAGTTGAG GACCAGCCTG TGTCTGGGTT GGGGTGAGGT AGGTCTCTCT TCCCCAAGTA 180
TCAGTGTCTC TTGCTATGCA ACACCATCCA AAGCGCAGGG CTTTAAAAAA CAGCCATTTA 240
CGATTGGCTC ACAGATCTGC AGCTGGGGCT GGGCTCAGCC GGGTGGCTTT TCTGCTGGTT 300
CCACATAATC ACTCATGCAG CTGTTCTCAT CTGGTGCCTT AACTGGGCCA GTGGGGTCTG 360
AGATAACCCA TCTCATTCCT GGGGCCTTGG CGCCAGCTGT CTGTGATGCC TCTCTGCATG 420
TGGTCTCCTC ATTTAGCAGC CTCACCTTCC TTCCGTGGCT CTGTATTGAG GGTATGGGGT 480
TCAAGATCTG CAGGGGTCTT CATGCCTTGG CTCTGGAATA GCGTCTGCAA GCGATGTCCA 540
GCATTGTGTC CTCCATGTTC TGTTGGTCAA AGCAAGTCAC AGGGCCAGAT TCAAGGGGAG 600
AGGGAGTAAT AACCCACCTC TTGATAGGCG GAGCTGCAAA ATGGTATGGC CATGCTTTTT 660
AATCTTCCCC 670