| Tag | Content |
|---|
EnhancerAtlas ID | HS121-00254 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:1688750-1689800 |
Target genes | | Number: 37 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Hnf4a | MA0114.3 | chr1:1689290-1689306 | AACGGACTTTAACCTC | - | 6 | | NR2C2 | MA0504.1 | chr1:1688916-1688931 | CAGGGTCAGGGGTCA | + | 6.63 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_24656 | chr1:1688839-1692365 | Colon_Crypt_2 | | SE_25090 | chr1:1687972-1692365 | Colon_Crypt_3 | | SE_34386 | chr1:1688849-1692450 | HCT-116 | | SE_41662 | chr1:1688486-1692273 | LNCaP | | SE_53732 | chr1:1689250-1691407 | Spleen | | SE_65437 | chr1:1688794-1691681 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I001757 | chr1 | 1688946 | 1691706 |
|
Enhancer Sequence | TTTAGGGGAG GAGAAAAGAG TTCACACCAG CTGCGATCTC CCTCTTGCGG AAAAGGTGTA 60
TGACTTAGAA AATAAAAAAA AAAATCTTTA AAAAGGTGTT TTCACCTCCC AGGGAAACGT 120
GCTCGGTGGC CACGGGCTCA CAGGGCCTAG GGTCGCGCCA CAGAGACAGG GTCAGGGGTC 180
AGTAGGGTCC GGAGTGACCA CCTCTCACCT GCTTGGCCCA TCACACGCAG GCTCAGGCCC 240
ACAACCCCCA CCCGGGCACC ACGCTGACCC AAGTGCACGC ACCACAGCCC TTCCCAGCCC 300
CCGGCCACTT GCCTGCCTGG CTCCTCAGTG ACGCTGGTGG GGCAGAAATG ACCACGAAAG 360
CCCATGGCTG GGCCACTCTT TGCTTGATGC CCTCCTCAGG CCCCCACGAA AACCCAAACC 420
AGTTGACATG GTGACTCTGT CCCTAGGATC CTCTGCACAC AGTTTCTGGC CCCACGGGAG 480
CCCAGGACCC CTCAAGGACC CGCTTCCCCC CCTGCACACA GCTCACTACC TCCCTGCATG 540
AACGGACTTT AACCTCACTC ACTCTCACAG TAAAAATCAC AGGTTTAAAA GTCCGTGGCA 600
GCCCTGACAC AGCCACCCGC GCTTTGCTGG CTCTGACCCC GACCACTGTG CCCGGTGTTT 660
CTCCACAGGC AGGGCCCACC CCGGTGGGAT TCCCATTACC ACGTTAGTCA CAGAAAACAT 720
CCCAGCCCAG AACCGGGAAC ACACACCACG GAGCCTGCTC CTGTTCCCAG AAGCCAAGGG 780
AGGGCGCAGC GGGGCTGGCC ACCGTCGTCA GCGCTCACCG CCTATCCTCA GCCCCAAAGG 840
ACAAGTTCTT ATACCACCGC GCCAGCCAGC TAGTTCCAAG TTGCCCAATC GAGAAAGCTG 900
CTGCCTGCCA TGCCTCTTCC CAGCAGTGAC TTCCCCAGGA GTGTGACCGT CCCACTAACA 960
CCCCCAGAAC CACAACACAG ACGCCGATGG CAGCCACAGG GCCACAGACC TTAGCCCATC 1020
GCTTGTGACC TTCGGAAGCT GGTCAGCACT 1050
|
