| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00696 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:234666450-234666770 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SP1 | MA0079.4 | chr1:234666718-234666733 | TAGACCCCGCCCCCA | + | 6.35 | | SP4 | MA0685.1 | chr1:234666718-234666735 | TAGACCCCGCCCCCACC | + | 6.29 |
|
| | Number of super-enhancer constituents: 31 | ID | Coordinate | Tissue/cell |
| SE_00256 | chr1:234663485-234676006 | Adipose_Nuclei | | SE_02030 | chr1:234666315-234673709 | Aorta | | SE_03087 | chr1:234666314-234666817 | Bladder | | SE_03277 | chr1:234666711-234672229 | Brain_Angular_Gyrus | | SE_03881 | chr1:234666237-234682343 | Brain_Anterior_Caudate | | SE_04834 | chr1:234666259-234675069 | Brain_Cingulate_Gyrus | | SE_06031 | chr1:234663344-234683729 | Brain_Hippocampus_Middle | | SE_06706 | chr1:234666212-234673639 | Brain_Hippocampus_Middle_150 | | SE_07941 | chr1:234666334-234683583 | Brain_Inferior_Temporal_Lobe | | SE_25924 | chr1:234663807-234675842 | Duodenum_Smooth_Muscle | | SE_26846 | chr1:234665500-234678526 | Esophagus | | SE_27803 | chr1:234666349-234675646 | Fetal_Intestine | | SE_28730 | chr1:234666297-234675651 | Fetal_Intestine_Large | | SE_29594 | chr1:234665507-234675864 | Fetal_Muscle | | SE_32368 | chr1:234666330-234673319 | Gastric | | SE_33857 | chr1:234666701-234671464 | HCC1954 | | SE_37893 | chr1:234666332-234672874 | HSMMtube | | SE_40608 | chr1:234665473-234682184 | Left_Ventricle | | SE_42375 | chr1:234663644-234677599 | Lung | | SE_45860 | chr1:234666738-234672537 | Osteoblasts | | SE_47023 | chr1:234666406-234666700 | Ovary | | SE_47023 | chr1:234666723-234667685 | Ovary | | SE_47805 | chr1:234666387-234669564 | Pancreas | | SE_48212 | chr1:234666321-234682043 | Psoas_Muscle | | SE_48672 | chr1:234666341-234677649 | Right_Atrium | | SE_49707 | chr1:234666369-234667738 | Right_Ventricle | | SE_51126 | chr1:234663734-234677260 | Skeletal_Muscle | | SE_54537 | chr1:234666303-234682504 | Stomach_Smooth_Muscle | | SE_61054 | chr1:234622432-234680799 | HBL1 | | SE_61473 | chr1:234622384-234680928 | Toledo | | SE_68387 | chr1:234634206-234681763 | TC32 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I234527 | chr1 | 234663203 | 234683328 |
|
Enhancer Sequence | TAGGATGAGG TAGGGGCAGG GACAGGAGAG AGTTGGGTGG GGGCAATGAA AGCCCTGGCC 60
TGGCGGACAT AGTTTCAGTC TGCTCTGCAG AAGTTAAAGT ACGCCTGGGA AGACAAGGCA 120
GATAACGTAG CACGCAACTG AGCTCATGAG TGGAGGAGAG AAAAGAGAAA ATGTGTCTCT 180
GTGGGTAACC CCTGGGGGAG CCCATTTTGC AGTAAATGCA GAAACAGTAT TATTAAGTCA 240
GGATGAGCGT AAGAAGGACT GCCAGAAATA GACCCCGCCC CCACCCCCCG CACCGCCCCA 300
GGTCACTGCA CCTGCCCAAA 320
|
