Tag | Content |
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EnhancerAtlas ID | HS120-00651 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:223925920-223926930 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nkx2-5(var.2) | MA0503.1 | chr1:223926788-223926799 | AGGCACTCAAG | + | 6.14 | STAT3 | MA0144.2 | chr1:223926464-223926475 | CTTCCCAGAAG | - | 6.14 |
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| Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
SE_00224 | chr1:223925520-223928901 | Adipose_Nuclei | SE_01908 | chr1:223926095-223926935 | Aorta | SE_09681 | chr1:223926086-223926867 | CD14 | SE_23408 | chr1:223925806-223926930 | Colon_Crypt_1 | SE_24051 | chr1:223926231-223926878 | Colon_Crypt_2 | SE_25230 | chr1:223926296-223926903 | Colon_Crypt_3 | SE_26209 | chr1:223926103-223928290 | Duodenum_Smooth_Muscle | SE_26925 | chr1:223926095-223928145 | Esophagus | SE_31491 | chr1:223923671-223928232 | Gastric | SE_33950 | chr1:223925357-223926983 | HCC1954 | SE_34545 | chr1:223926186-223927072 | HCT-116 | SE_37129 | chr1:223924560-223926499 | HSMMtube | SE_37129 | chr1:223926584-223928521 | HSMMtube | SE_42269 | chr1:223925796-223927012 | Lung | SE_50365 | chr1:223925795-223926977 | Sigmoid_Colon | SE_53249 | chr1:223926157-223926979 | Small_Intestine | SE_64794 | chr1:223926064-223928210 | NHEK | SE_65644 | chr1:223925909-223927309 | Pancreatic_islets |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I223736 | chr1 | 223924574 | 223930136 |
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Enhancer Sequence | ACAATCATAG CTCACTGCAG CCTTGACCTC CCAGGTTCAA AGTGATTCTC CTGCCTCAGC 60 CTCCCAAGTT GCTGGGACGA TAGAAGCATG ACACCACACC TGGCTAATTT TTTAAAAATA 120 ATTTTTATAG AGACAGGGTC TCACAGTATA GTGAGATTTC AGGGTGGTCT TGAAATCCTG 180 AGGGCTCAAG AAATCCTCCA GCCCTGGCCT CCCAAGAGCT AGAATTACAG GCATGAGCCA 240 CCGTACCTAG CCCTATTGCT ATTTTTATTA GCATTACATT AAGTTTATAG GCTAACTTAA 300 GAGGACATGG CATTTTTATG ATAATGAGTT TTTGCAGTCA AGAACGCAGG CCAGTTTTTT 360 TTAAATGGGG TAAATGATTG TCCAAGCGCC TCCAGGCAGG CTCACGTGCA CACTCTGGAG 420 TCAGTGAAGA AGGTGAACAG CTGACAGGAG CAGCCTCCCA GTCAGAGAAG CCCTGCACAC 480 TGTTGCAAAC AGACAGCTTG CATCTGGAGT CTTCTGTGAT CCGAGGAGGA AGCGTGGCTG 540 AGTCCTTCCC AGAAGAGGGT CTGGAGCTGT GAGTTGGGGA CAATTGTCAG ATTCTAGCAG 600 TGAAAGTGGT TCATGTGCAG GTGCAACCTG CCCCGCAGTC ACGGGACACA GCCACATGGA 660 GCCGAGCCAC GCTCTCAGAG AAGGAGCCAG GGAAGAAACA CCCTAACTGC ACTCCTCCCT 720 TCTTCTGGCC CCCAGCAGCC ATAGGCCCTG GGCCCCCGGT GAGATACCCA TAGAGATCAG 780 CTCCCAGGCA GCAGGATGGA GGGTGTAGAC TGGACATGAA GAGGCAGCTG GAATGTATCG 840 GGCACTCAGC TCCAGCTCAC CACGATCCAG GCACTCAAGT TCCCAAGACA ATAGTTTCTG 900 CTCTCAGATA AATGGAATAA TTAAGGATCA AAAGGTTATC AACAGGTAAC CAAGCATAAA 960 CAGATTTTTT TTTTTTTTTT TTTTAGACAG AGTCTCACTC TGTGCCCCAG 1010
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